Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g1069 ATGATAGGAATTTCCTTTATTCTGTGGCATGCAATTGCAATGGCTTCCATGTGCAACATCTTCCTCATATTTTGCTTGTTTAATCTTCTAGCTTCCATAGGGCCATACCCATTTGTAGTTCATTCAGCTAGTGATGTTCCAATTAATGTAACCAAGCACTTCCACTTCCTTGATTTCAGCTTCATCAACAACCCAAGAATTGTCCATGATGTGAAGCTCCTAGGCAGTGCCAAGTTCTCAAATGAAAAGGGTGCACTTCAAATTCCCAATGAATCACAAGAGACTGATATAAGACACCAAGCAGGTAGAGGTATCTATTCCTTTCCAATTCGCTTGCTAGATCCAACTACAAAGACCCCAGCTTCCTTTCAAACCACTTTTTCTTTTCAGTTGAACAATTCCACCACCTCTGAGCAAAGTGCTAATGGAGGTAGTGGCCTCACTTTCATCATAGTCCCTGATGAATTCACTGTGGGTAGGCCAGGGCCATGGCTTGGCATGCTTAATGATGCTTGTGAGAATGATTACAAGGCAGTGGCAGTGGAGTTTGACACAAGAAAAAACCCAGAGTTTGGAGATCCAAATGACAACCATGTTGGCATCAACTTAGGTACCATAGTATCTACCAAAATCATTAATGTTTCTGATGTTGGTGTGTCCCTTAAGGATGGTTTTGTTCACCGTGCTTGGATCACCTATGATGGTCCTCAAAGGAAAATGGACATTCATCTTGGACTAGCCAACCAAGAGGTTTATCCTTCTAAGCCTATCTTCTCAGAATCTGTGGACCTTTCTCCTTATCTAAATGAATACATGTTTGTGGGGTTCTCAGCTTCCACAGGAAATCACACGCAAATCCACAGCATACTCTCTTGGAACTTCACTTCCACAAGCCAAGCCTTTCTTCGCTTCCCTTCATCTGAAACCTGTGAGGGTAAGATCTTACTTGAGAATAGTACAACAGCAGCAGCAGCAACAACAACCAAGAAGTCCACTAAGAATGAACCACCACACAGCTTTTTGATTTTTGTGGCTGCTGTGGCATTGGCTCTGGCTATTTTCCTTGGTTTTTACTTCATCAGTAAGCACAGAAGAAACGTTTCCAAGTTAAGCTCATCAGTGGACACGGAAATTCACAGGCCAAGGCCTCCAAACAAGCCACGTCGCTTCGCGTTTTCTCAGCTTTCATCTTCAACTCGGTCATTTAGTGATATAGAGTTGCTTGGTAGTGATTCTAGAGGAGTGTACTACAGAGGAAAGCTTTCTAATGGCAGCCAGGTAGCTGTGAAAAGATTCTCAGCTCAGTTTCTTAATACACATGGCTCGGATAAGAAGCGTTTGTTGAAGGAAATCAAAGCCATTAGTCATGCTCGCCACCCGAATTTGCTTCCTATAAGAGGGTGGTGTCAAGACAACCATGAGATCATGGTGGTCTATGAGTTTGTCCCCAATGGAAGCCTAGATAAATGGCTATTTGGTGCTGGTGTTCTTCCATGGACACGGCGACTCAAAGTTATTAAAGATGTAGCTGATGGCTTGAGCTTCATCCACAGTAGGCAACTAGCCCACAAGAACTTGAAATGCAGCAGTGTGTTTCTAGATGTCAATTTTAGAGCTGTTTTGGGTGATTTTGGGTTTGTGCTAATGGGGGCAGAATCAAAACAGTTTGAGTCAGCAGTGTGCCAAGGTGCAGATGTGTTTGAGTTTGGTGTCCTTGTTTTGGAAGTGATAGCTGGAAGGATAAGAGAGGAGAAAGAGGAGGCCAGTCCAGAAGAGAGGAACTTGTTGGATTTTGCTTGGAACTTGCATGAGACTAATGAGAAAGTGAAGTTGGTGGACAGAAGAATGGGGTCATTGATCAACTTGGAGCAGGCAGTTCGTGTTCTGGAAATTGGATTGCTTTGCACTCTCAATGAGAACAAAGGGAGACCCTCCATGGAGCAAGTGGTGGGGTTTCTTCTTAACATGGAGAAGCCTATTCCAGAGTTGCCAAGAACTCGCCCTATTGCCTTGTTCCCCTACAACAGTGCCAACACTGGACTTTGCAATGCATACTCTTGTACTTTTTGA 2070 0.4362 MIGISFILWHAIAMASMCNIFLIFCLFNLLASIGPYPFVVHSASDVPINVTKHFHFLDFSFINNPRIVHDVKLLGSAKFSNEKGALQIPNESQETDIRHQAGRGIYSFPIRLLDPTTKTPASFQTTFSFQLNNSTTSEQSANGGSGLTFIIVPDEFTVGRPGPWLGMLNDACENDYKAVAVEFDTRKNPEFGDPNDNHVGINLGTIVSTKIINVSDVGVSLKDGFVHRAWITYDGPQRKMDIHLGLANQEVYPSKPIFSESVDLSPYLNEYMFVGFSASTGNHTQIHSILSWNFTSTSQAFLRFPSSETCEGKILLENSTTAAAATTTKKSTKNEPPHSFLIFVAAVALALAIFLGFYFISKHRRNVSKLSSSVDTEIHRPRPPNKPRRFAFSQLSSSTRSFSDIELLGSDSRGVYYRGKLSNGSQVAVKRFSAQFLNTHGSDKKRLLKEIKAISHARHPNLLPIRGWCQDNHEIMVVYEFVPNGSLDKWLFGAGVLPWTRRLKVIKDVADGLSFIHSRQLAHKNLKCSSVFLDVNFRAVLGDFGFVLMGAESKQFESAVCQGADVFEFGVLVLEVIAGRIREEKEEASPEERNLLDFAWNLHETNEKVKLVDRRMGSLINLEQAVRVLEIGLLCTLNENKGRPSMEQVVGFLLNMEKPIPELPRTRPIALFPYNSANTGLCNAYSCTF* 690
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g1069 689 Gene3D Transferase(Phosphotransferase) domain 1 482 555 - -
Apr9g1069 689 SUPERFAMILY Protein kinase-like (PK-like) 380 653 IPR011009 -
Apr9g1069 689 ProSitePatterns Legume lectins beta-chain signature. 179 185 IPR019825 -
Apr9g1069 689 SUPERFAMILY Concanavalin A-like lectins/glucanases 59 298 IPR013320 -
Apr9g1069 689 Pfam Legume lectin domain 54 299 IPR001220 GO:0030246
Apr9g1069 689 Gene3D Transferase(Phosphotransferase) domain 1 556 663 - -
Apr9g1069 689 CDD lectin_legume_LecRK_Arcelin_ConA 57 297 IPR001220 GO:0030246
Apr9g1069 689 Gene3D Phosphorylase Kinase; domain 1 362 481 - -
Apr9g1069 689 PANTHER - 41 671 - -
Apr9g1069 689 PANTHER L-TYPE LECTIN-DOMAIN CONTAINING RECEPTOR KINASE VIII.2-LIKE 41 671 - -
Apr9g1069 689 Pfam Protein tyrosine and serine/threonine kinase 407 550 IPR001245 GO:0004672|GO:0006468
Apr9g1069 689 Gene3D - 51 304 - -
Apr9g1069 689 ProSiteProfiles Protein kinase domain profile. 402 689 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g1069 Apr-Chr9 20074524 20077120 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr9g1069 68 672 Receptor kinase-like Gene Family AT5G55830 32.710 1.55e-96 310
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Apr9g1069 Lectin_legB 6.8e-57 CL0004
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g1069 - - gmx:100807767 1188.33