LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Apr9g1048	ATGGTTTCCTCTCAGTTCTCTATATTAAATGGAAACACTTCACAGAAGCCTTTCCTGAACCATTTGCTTCTTCCAAGTGGGCCACCTGATCTTTTGACTTATTCTGATTGTTTGGATTCTGAATTTTCTGATGTGTTTGGTCCATCTCCTGTTGAAGCCTCCATAGCAGTAAACTCCAAGAAGCATGGAAATTTGGTAGTAATACCAGGTTCAAATGAAAACATTTACAATGATCCTGCTGTAATTCACATTGGCTCACAATCTTTACTGTCTCCCACAACCTGTATTAGTCAGTCCTTGGAGCTTAGCAAGCTCACGTTACATGACAATTTGGATCTTGTGGAGGAGGTCTTTCAAAAAACTAAGAACGAACTCAAGGAAGATTCTGTTACCAATGATGCTGTAGAGAAAAATAATTTACATTTGAATAATTACTGTCTAAATGATCAGACTATTGGAGTTGAGGATTTTGATGTTTTGAAGGTTGTTGGCCAAGGCGCTTTTGGTAAGGTGTACCAGGTGAGGAAGGCAGGTACATCAGAAATATATGCTATGAAGGTCATGTGCAAGGATAAGATCATGCAAAGAAATCAAGCTGAATATGTAAAATCTGAAAGGGATTTATTGACAAAGGTGGATCACTCGTTTATTGTGCGGCTCAGATACTCATTCCAAACCAAATATAGGTTGTACCTTGTGCTTGATTTTGTCAATGGTGGCCACCTTTTCTTTCAGCTCTATCGCCAAGGCCTGTTCAGGGAAGAATTGGCACGCTTCTATGTTGCAGAGATTATTTGTGCAGTTTCTTATCTTCATGCAAATGACATAATGCACAGGGATCTTAAACCTGAAAATATTCTTCTCGATGCCGATGGTCATGTAGTGTTAACAGATTTTGGCCTGGCTAAGCAATTCAATAAGAATGAAAGGTCAAATTCTATGTGTGGAACTTTAGAGTACATGGCCCCTGAAATTGTTATGGGGAAAGGTCATGATAAAGTAGCTGACTGGTGGAGTGTGGGAATTTTACTGTATGAAATGCTCACTGGAAAGCTTCCCTTCGCTGGTGGAAATAGACAAAAGATCCAGCAGAAGATAATTAAAGACAAAATCAAGCTTCCATCTTTTTTGTCAAGTGAAGCACATTCTCTGTTAAAAGGGCTGCTGCAGAAGGATGCCAGCAAACGCCTTGGAAGTGGACTAAGTGGAGGTGAGGAAATTAAAGGTCACAAATGGTTTAAATCAGTCAGTTGGAAAAAACTGGAAGCCCGTGAAATAAGGCCAAGCTTTGTCCCGGAAGTTGATGGGAAGCAGTGTGTTGCTAACTTTGAGGAGCGGTGGACTACCATGCCCTTGCTGGATTCTCCAGCTGCAAGTCCCAAAAAGGATGATAATACTTTCAAGAAGTTCTCCTATACTGCTACTCCTGTTGTATTGTGA	1440	0.4042	MVSSQFSILNGNTSQKPFLNHLLLPSGPPDLLTYSDCLDSEFSDVFGPSPVEASIAVNSKKHGNLVVIPGSNENIYNDPAVIHIGSQSLLSPTTCISQSLELSKLTLHDNLDLVEEVFQKTKNELKEDSVTNDAVEKNNLHLNNYCLNDQTIGVEDFDVLKVVGQGAFGKVYQVRKAGTSEIYAMKVMCKDKIMQRNQAEYVKSERDLLTKVDHSFIVRLRYSFQTKYRLYLVLDFVNGGHLFFQLYRQGLFREELARFYVAEIICAVSYLHANDIMHRDLKPENILLDADGHVVLTDFGLAKQFNKNERSNSMCGTLEYMAPEIVMGKGHDKVADWWSVGILLYEMLTGKLPFAGGNRQKIQQKIIKDKIKLPSFLSSEAHSLLKGLLQKDASKRLGSGLSGGEEIKGHKWFKSVSWKKLEAREIRPSFVPEVDGKQCVANFEERWTTMPLLDSPAASPKKDDNTFKKFSYTATPVVL*	480

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Apr9g1048	479	ProSiteProfiles	AGC-kinase C-terminal domain profile.	414	479	IPR000961	GO:0004674\|GO:0005524\|GO:0006468
	Apr9g1048	479	CDD	STKc_AGC	163	413	IPR045270	GO:0004674\|GO:0005524
	Apr9g1048	479	Gene3D	Phosphorylase Kinase; domain 1	155	455	-	-
	Apr9g1048	479	SMART	pkinase_C_6	414	474	IPR000961	GO:0004674\|GO:0005524\|GO:0006468
	Apr9g1048	479	PANTHER	SERINE/THREONINE-PROTEIN KINASE ATPK2/ATPK19	1	476	-	-
	Apr9g1048	479	Pfam	Protein kinase domain	158	413	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Apr9g1048	479	ProSiteProfiles	Protein kinase domain profile.	157	413	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Apr9g1048	479	PANTHER	RIBOSOMAL PROTEIN S6 KINASE	1	476	-	-
	Apr9g1048	479	SUPERFAMILY	Protein kinase-like (PK-like)	142	457	IPR011009	-
	Apr9g1048	479	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	276	288	IPR008271	GO:0004672\|GO:0006468
	Apr9g1048	479	SMART	serkin_6	157	413	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Apr9g1048	479	Gene3D	Transferase(Phosphotransferase) domain 1	237	432	-	-
	Apr9g1048	479	ProSitePatterns	Protein kinases ATP-binding region signature.	163	186	IPR017441	GO:0005524

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Apr9g1048	Apr-Chr9	19845011	19848875	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Apr9g1048	1	476	AGC Kinase Gene Family	AT3G08720	61.826	0.0	584

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	AGC-Pl	Apr9g1048		Pkinase	3.3e-75	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Apr9g1048	K04688		-	gmx:100803509	756.518