Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g1041 ATGCTGAGAAGCAGAAGTATATTACCTCCTCCACCATTGCTTGCTCTGAGTAGAAGGCTACCGTCATCTTCACCGTCACTGTTATCGTCGCCGTTATCGTCACCGTCATCTTCCATCACCCACTCCAGAAACCCTAAATCCTCATTCCACCGATTTCCTCTCTTCTCCAACTCTCACATTTTCCAAACCATGACGCTTTCCAAGTGCTTCTCTCACGTGGGACCCACCATTCCCATATCGGGTAAACCCGAATCCGAATCCGAATCCGAATCCCCTCTCTCTCTCGTTGTGGTTTCCTTCTACAAGTTCGCGGATTTCCCTGACCATGCCCTAATGCGAAACCCCTTGAAGCAACTCTGTCAACAGCTGCGTGTTTCAGGTGGAATTATTCTTGCGGCTGAAGGGATCAATGGCAGCATATGTGGCACTCGGGAGTCCGTGGAGAGAGTTCTTGAGTTTGTGCAAAGTGATGATCGTTTGACGGGGCTGAGACGTATGGAATCGCCGGTTAGTCTTGAGGAGGAGGCCATCCATCATGGACATAGCGCCGCTTCTCCCCTTGCCGCCGGGGAGGATGCGCCCTTCCGATGGGATCATGTGAGGGTCAAGTTGAAGAAAGAGATTGTCACTCTTGGGATGCCAACTGTGTCGCCTACTGAAAGGGTTGGAAAGTATGTTGGCCCAAAAGATTGGAATGCTTTGATTAGTGATCCAGATGTAGTGGTAATTGATGTGCGGAATAACTATGAAACCAGAATAGGAAAGTTTAAAGGAGCAGTTGATCCTTGTACTACATCATTTCGTGAATTCCCATCTTGGGTGGAGGATCATTTCCAGCATACTGGAACAGATGGTGGAGTCCATCCAAAAGTTGAGCCAAACAACTCAGTAAGAAATGATGAAAAAGAAATAGAGGATTCAAAACAATGTATGCCGCGGGTTGCAATGTATTGTACCGGAGGTATTCGATGTGAGAAAGCTTCAAGTCTACTTCTCAGCAAAGGTTTCAAAGAGGTTTATCACCTGGAAGGTGGAATTCTGAAATATCTTGAGGAGGTTCCAGAAACAGAAAGCCTCTGGGAAGGAGAGTGTTTTGTTTTCGACAAACGGGTCTCTGTTGAGCATGGTTTAGTGCAAGGAAATTTCAAGCTCTGCTATGGTTGTAAGCAGCCTGTGAGTGATGCTGACATGGAAGCCCCAGAATTTGAATATGGTGTCTCGTGTCCTCACTGTTTTTCGCTGAAATCAGAAGAAGAGAAGGAAAGGGCTCGAGCCCGGCAAAGACAATTTGAGAGGTGGGGAATCATCGGCGGTCCTGATAAGGGTCGCCGGCCAACTCCGGATGGTGTTGACAGGGAACCAAACCAGCTTTCCCGTTCGGTTTAA 1386 0.4776 MLRSRSILPPPPLLALSRRLPSSSPSLLSSPLSSPSSSITHSRNPKSSFHRFPLFSNSHIFQTMTLSKCFSHVGPTIPISGKPESESESESPLSLVVVSFYKFADFPDHALMRNPLKQLCQQLRVSGGIILAAEGINGSICGTRESVERVLEFVQSDDRLTGLRRMESPVSLEEEAIHHGHSAASPLAAGEDAPFRWDHVRVKLKKEIVTLGMPTVSPTERVGKYVGPKDWNALISDPDVVVIDVRNNYETRIGKFKGAVDPCTTSFREFPSWVEDHFQHTGTDGGVHPKVEPNNSVRNDEKEIEDSKQCMPRVAMYCTGGIRCEKASSLLLSKGFKEVYHLEGGILKYLEEVPETESLWEGECFVFDKRVSVEHGLVQGNFKLCYGCKQPVSDADMEAPEFEYGVSCPHCFSLKSEEEKERARARQRQFERWGIIGGPDKGRRPTPDGVDREPNQLSRSV* 462
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g1041 461 ProSiteProfiles Rhodanese domain profile. 236 358 IPR001763 -
Apr9g1041 461 Gene3D - 210 393 IPR036873 -
Apr9g1041 461 PANTHER THIOSULFATE SULFURTRANSFERASE/RHODANESE-LIKE DOMAIN-CONTAINING PROTEIN 2 90 441 IPR020936 -
Apr9g1041 461 PANTHER THIOSULFATE SULFURTRANSFERASE/RHODANESE-LIKE DOMAIN-CONTAINING PROTEIN 2 90 441 - -
Apr9g1041 461 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 205 384 IPR036873 -
Apr9g1041 461 SMART rhod_4 226 355 IPR001763 -
Apr9g1041 461 Hamap tRNA uridine(34) hydroxylase [trhO]. 93 395 IPR020936 -
Apr9g1041 461 Pfam UPF0176 acylphosphatase like domain 96 208 IPR040503 -
Apr9g1041 461 CDD RHOD_YceA 223 351 - -
Apr9g1041 461 Gene3D - 83 209 - -
Apr9g1041 461 MobiDBLite consensus disorder prediction 423 461 - -
Apr9g1041 461 Pfam Rhodanese-like domain 229 351 IPR001763 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g1041 Apr-Chr9 19766466 19769972 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr9g1041 94 455 Sulfurtransferasese or Rhodanese AT2G40760 75.068 0.0 569
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g1041 - - gmx:100784854 693.73