Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g1038 ATGAAAATTGTTTCCTCAGAAACTGAAAGTGTTTCAGCCAATAGAGAGAGAATGATAATAAGAGAGCTTGTTCAGGGTCAAGAAGCTGCTACACAACTCAAGGTTCTTCTTCAGAAACCCTTTGGGAGTGAAGGGTATCTGTCATCTGAGGAGCTTTTGGCCAATGTACTCAGATCTTTCAATGAGGTCATTTCTATCATAACTTCTTCTTCTTCAGAACTTGGTTCTGCAGGTGGGGTGGCTCACCGGAATCTTCTCAGTTCCGGCGAAAATGGGTCCCAGGTGGCCGGTTCCGGATATGATCCAACATGTGAAGATTCTAGTGAGAGTAGGAAGAGATCCCAAAAGGGTGGAAGAGGTTGCTACAAAAGAAGGAAGAGAGCACAGACATGGACCATAGTCTCCTACAACACTGATGATAATTATGTATGGAGGAAGTATGGACAGAAGGAAATCATGAATTCTGAATTCCCTAGGAGCTACTTCAGGTGCAGTCACAAGTATGATGAAGATTGTCGAGCAACCAAACAAGTGCAAAGGGATCAAGAAAATCCTGATATGTATCGAACTACATACATTGGCTGTCACACATGCAATGCCACTCCAAAGGCTACAAATTCGATTACAGATTCAACAACTTGGGAATCATATCTTCTTAAATCTGATCCTAACAAGAAGGTGCCAAATGATCATGATCACCACAATATTAGCGCACCAAGCCTAACTATAAAACAAGAATTACCCAAAGAGGACACACCAGGTGATGTTAAAGATCAGAAGCTGGATCATAGCCTGTGGTCTGAGTTGAAAGATTTTGAACCATACAAGCCTGCCATTAATGTGCCCTTAAAGATGGTGTCTGATAATGGTGCACGTAACTCTCAATGCTTGGACATGGATTTTGGGGTGGAGTCTGTTCATTTTGGCTCTGACTTCCACTTTGATGAAAGCCACTTTGATTAG 963 0.4226 MKIVSSETESVSANRERMIIRELVQGQEAATQLKVLLQKPFGSEGYLSSEELLANVLRSFNEVISIITSSSSELGSAGGVAHRNLLSSGENGSQVAGSGYDPTCEDSSESRKRSQKGGRGCYKRRKRAQTWTIVSYNTDDNYVWRKYGQKEIMNSEFPRSYFRCSHKYDEDCRATKQVQRDQENPDMYRTTYIGCHTCNATPKATNSITDSTTWESYLLKSDPNKKVPNDHDHHNISAPSLTIKQELPKEDTPGDVKDQKLDHSLWSELKDFEPYKPAINVPLKMVSDNGARNSQCLDMDFGVESVHFGSDFHFDESHFD* 321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g1038 320 MobiDBLite consensus disorder prediction 88 104 - -
Apr9g1038 320 PANTHER WRKY FAMILY TRANSCRIPTION FACTOR 9 294 - -
Apr9g1038 320 SUPERFAMILY WRKY DNA-binding domain 135 200 IPR036576 GO:0003700|GO:0006355|GO:0043565
Apr9g1038 320 MobiDBLite consensus disorder prediction 88 121 - -
Apr9g1038 320 Gene3D WRKY domain 121 193 IPR036576 GO:0003700|GO:0006355|GO:0043565
Apr9g1038 320 ProSiteProfiles WRKY domain profile. 139 201 IPR003657 GO:0003700|GO:0006355|GO:0043565
Apr9g1038 320 SMART WRKY_cls 138 200 IPR003657 GO:0003700|GO:0006355|GO:0043565
Apr9g1038 320 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 9 294 IPR044810 GO:0003700
Apr9g1038 320 Pfam WRKY DNA -binding domain 139 199 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g1038 Apr-Chr9 19745124 19748677 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr9g1038 19 204 WRKY Transcription Factor Family AT3G56400 46.939 1.93e-48 162
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Apr9g1038 WRKY 7.1e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g1038 - - gmx:100796071 351.288