Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g1037 ATGGCCAGCCAAACAGAGCAGAAAATCTCAGAAACCATGGAAGAGGTTGTGAATTCTACTAAGCATGCTTGTGAATTGGCACGAAACCTCGAACCAGAAATTCCCAACATGGCCAACCAACCTAACATGCTGTTGTTGTCCATTGATGAAGCAATGAAAGCATTTGGTGCTGCCAAAGAAAGACTATTAACCATGATGTCCCAAGAAGGCCTAATCATAGCACCCTCTTCATTTGCTTCAATGTTGCCACGTGATGAAACACCTCAGGGTCAGATTGGTGCAAGTAGTGTTACCTCAATGCAAGAATTGATGAGTTCTGGAAGTTATGCACACAACATGGATCAGTTGTTACTAATGCAACAACCCTTTGATGTGAGAGCCTTGCTTGAAAATAGGGGCACCCTTCAGATTGGTGAAATGGGTAGGAAGGATTTGGAAGGTTCAGATAGATCAAAAGGGTCTGAAGGAGAAATGCAAGGAATTGAAGCCTCACCATCAAGATCACGAAAAGGAAACAGGAAAAATGATCTGAAAAAGAGAACAATATTGCTTCCTGCACCACAGGTTGGAAACATAGATATGCCTCCAGAGGATGGTTTTACTTGGAGAAAATATGGCCAGAAAGAGATACTTGGTACCAAATTCCCAAGGGCTTACTATAGGTGTACCCACCAGAAATTATATGCATGCCCAGCTAAGAAGCAAGTACAAAGACTCGATGATAATCCTAACATATTTGAAGTAACATACCGAGGTGATCATACATGTCACATGTCATCAACAGCACCATCATCATTTCCACCACCACAACTTCTAGTAGATATGTCAAAGGACATTACTCAAACTCAAAGCACAATTTCCCCAGAATTGTCTCCATCATCAAAAGTTTCAGGGTGGTTGTCACCGGTTAACCTCAGCCTCCACAGTGGCAGTGGCGGCGGCGGCGCTGGTCCCTCTACTTCAAAATATGGTACTGATTATTTTGTGGCTGATATGGCTGATGCTATGTTCAACTCGGGTAGCAGCAGTGGCAATAGCATGGAATGTCTCTTTCCTTCCACTGATGATAAATGGGAAGCAGGTGAGAAGAAAAGCTGA 1098 0.4317 MASQTEQKISETMEEVVNSTKHACELARNLEPEIPNMANQPNMLLLSIDEAMKAFGAAKERLLTMMSQEGLIIAPSSFASMLPRDETPQGQIGASSVTSMQELMSSGSYAHNMDQLLLMQQPFDVRALLENRGTLQIGEMGRKDLEGSDRSKGSEGEMQGIEASPSRSRKGNRKNDLKKRTILLPAPQVGNIDMPPEDGFTWRKYGQKEILGTKFPRAYYRCTHQKLYACPAKKQVQRLDDNPNIFEVTYRGDHTCHMSSTAPSSFPPPQLLVDMSKDITQTQSTISPELSPSSKVSGWLSPVNLSLHSGSGGGGAGPSTSKYGTDYFVADMADAMFNSGSSSGNSMECLFPSTDDKWEAGEKKS* 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g1037 365 MobiDBLite consensus disorder prediction 139 180 - -
Apr9g1037 365 Pfam WRKY DNA -binding domain 197 256 IPR003657 GO:0003700|GO:0006355|GO:0043565
Apr9g1037 365 PANTHER WRKY TRANSCRIPTION FACTOR 55 13 285 - -
Apr9g1037 365 SUPERFAMILY WRKY DNA-binding domain 195 258 IPR036576 GO:0003700|GO:0006355|GO:0043565
Apr9g1037 365 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 13 285 IPR044810 GO:0003700
Apr9g1037 365 MobiDBLite consensus disorder prediction 342 365 - -
Apr9g1037 365 MobiDBLite consensus disorder prediction 139 156 - -
Apr9g1037 365 ProSiteProfiles WRKY domain profile. 197 259 IPR003657 GO:0003700|GO:0006355|GO:0043565
Apr9g1037 365 SMART WRKY_cls 196 258 IPR003657 GO:0003700|GO:0006355|GO:0043565
Apr9g1037 365 Gene3D WRKY domain 188 259 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g1037 Apr-Chr9 19737886 19740842 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr9g1037 7 355 WRKY Transcription Factor Family AT2G40740 34.943 1.25e-54 180
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Apr9g1037 WRKY 9.8e-27 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g1037 - - mtr:MTR_5g067680 360.147