Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g1034 ATGCCGAATCCCGAGGGTCACCGTAACCAACACCGGTCGAGGACTCGACCGTCCACGTCAGCGCCGGTTCGGGCGAGGGTTTCGCTGAAGCAGTTGCTACGGGTGACGTCGGTAGCGAGTGGTATTCAGTTCGGTTGGGCCTTGCAACTCTCTCTGTTAACGCCGTATGTGCAGCAGTTGGGGATTCCTCATCAATGGGCCAGCATCATATGGCTCTGCGGCCCTGTTTCTGGGCTTTTTGTTCAGCCCTTAGTGGGCCACATGAGTGACCGCTGCACTAGCCGGTTCGGTCGACGAAAACCGTTTATATTGCTCGGTGCGGTGGCGATCGTCGTCGCCGTTCTCATCATCGGTTACGCCGCCGATATCGGGTGGTTGCTCGGCGACACCGAGTCTTACCGGCCTTGGGCTATAACAGTTTTCGTCATCGGGTTTTGGATCCTTGACGTCGCTAACAACGTTACGCAAGGTCCTTGCAGAGCTTTGCTCGGTGATCTCACTAGCAAGGATCCTCGAAGGACACGTGTTGCAAATGCTTATTACTCGCTATTTATGGCTGTTGGCAATGTTCTTGGCTATGCAACTGGATCATACAGTGGCTGGCACAAGATTTTTACTTTTGCACTTTCCCCTGCTTGCACAATCAGTTGTGCAAATCTCAAGTCTGCTTTCTTTCTTGACATTGCTTTCATTGTGGTCACAACATATATCAGCATCATGGCAGCTCATGAAGTGCCTTTAAATTCAGATGAGGCAGCCCATACTGAAGCAGGGGGAGGGGAGTCAGGTAGTGCAGAAGAAGCTTTCATGTGGGAATTATTTGGGACATTCAAATATTTTACAACGCCTGTGTGGATAATTCTGGCTGTTACTGCTCTGACATGGATTGGGTGGTTCCCATTTATCCTCTTTGATACTGACTGGATGGGTCGAGAGGTTTATGGTGGTGATCCAAATCAAGGCCTTATTTATGATGCTGGAGTTAGAATGGGAGCACTTGGTTTGTTACTTAATTCAGTTGTTCTTGGATTAACATCATTGCTCATGGAGTGGCTATGCAGGAAGAGGGGGGCTGGATTTGTGTGGGGAATCTCAAACATCCTGATGGCTGTTTGCTTTCTTGCACTACTAGTAGTAACCTATATGGCAAATAACATGGACTATGTAGGCAAAGATCTACCACCAACTGGCATTGTGGCAGCTGCCTTGATTATCTTTACTGTTCTTGGGTTTCCACTGTCTATCACTTACAGTGTTCCATATGCCTTAATTTCCACCCATATTGAGTCCTTGGGACTTGGCCAAGGGTTATCAATGGGTGTCTTAAATCTGGCAATAGTGATTCCACAGATAGTGGTGTCCCTGGGAAGTGGACCATGGGATCAGCTATTTGGTGGCGGAAACTCCCCAGCCTTTGCTGTGGCAGCTGTTGCAGCCCTTGTCAGTGGACTCATAGCTGTCTTGGCTATTCCTCGATCTGGTGGCACACAAAAGGCTCGAAGCCGTGTATGA 1512 0.4907 MPNPEGHRNQHRSRTRPSTSAPVRARVSLKQLLRVTSVASGIQFGWALQLSLLTPYVQQLGIPHQWASIIWLCGPVSGLFVQPLVGHMSDRCTSRFGRRKPFILLGAVAIVVAVLIIGYAADIGWLLGDTESYRPWAITVFVIGFWILDVANNVTQGPCRALLGDLTSKDPRRTRVANAYYSLFMAVGNVLGYATGSYSGWHKIFTFALSPACTISCANLKSAFFLDIAFIVVTTYISIMAAHEVPLNSDEAAHTEAGGGESGSAEEAFMWELFGTFKYFTTPVWIILAVTALTWIGWFPFILFDTDWMGREVYGGDPNQGLIYDAGVRMGALGLLLNSVVLGLTSLLMEWLCRKRGAGFVWGISNILMAVCFLALLVVTYMANNMDYVGKDLPPTGIVAAALIIFTVLGFPLSITYSVPYALISTHIESLGLGQGLSMGVLNLAIVIPQIVVSLGSGPWDQLFGGGNSPAFAVAAVAALVSGLIAVLAIPRSGGTQKARSRV* 504
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g1034 503 Pfam MFS/sugar transport protein 47 429 - -
Apr9g1034 503 CDD MFS_SLC45_SUC 32 469 - -
Apr9g1034 503 TIGRFAM GPH_sucrose: sucrose/H+ symporter 28 493 IPR005989 GO:0005887|GO:0008515|GO:0015770
Apr9g1034 503 Gene3D MFS general substrate transporter like domains 281 498 IPR036259 -
Apr9g1034 503 Gene3D MFS general substrate transporter like domains 28 246 IPR036259 -
Apr9g1034 503 PANTHER SUGAR TRANSPORTER 9 501 - -
Apr9g1034 503 PANTHER SUCROSE/H+ SYMPORTER, PLANT, MAJOR FACILITATOR SUPERFAMILY DOMAIN-CONTAINING PROTEIN-RELATED 9 501 - -
Apr9g1034 503 SUPERFAMILY MFS general substrate transporter 32 495 IPR036259 -
Apr9g1034 503 MobiDBLite consensus disorder prediction 1 23 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g1034 Apr-Chr9 19709298 19717170 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr9g1034 1 493 Sucrose Transporter Gene Family AT1G09960 67.723 0.0 673
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g1034 K15378 - gmx:100820483 856.284
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr9g1034 9 19709298 19717170 Apr9g1034 9 19709298 19717170 ECH