Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g1025 ATGGTGTTGAGGAAAGTGGGAAAATATGAGATTGGAAGGACCATTGGAGAGGGAACCTTTGCGAAGGTAAAGTTCGCTCAGAACACAGAGACTGGGGAGAGTGTCGCCATGAAGGTTCTCGATCGTAGCACCATCATCAAGCACAAAATGATCGACCAGATCAAGAGGGAGATTTCTATTATGAAGCTAGTCAGACATCCATATGTTGTTCGTCTGCATGAGGTTCTAGCAAGCCGTACTAAGATTTATATCATATTGGAGTTCATTACAGGTGGTGAATTGTTTGATAAAATTGTAAGCCATGGGCGTCTTAGTGAATCTGAATCTAGAAGATACTTCCAACAGCTTATTGATGGTGTAGATTGTTGCCACAGTAAGGGAGTTTATCATAGAGACTTAAAGCCTGAAAATCTTTTACTTGATTCACAAGGAAATTTAAAGATTTCAGATTTTGGTTTGAGTGCATTGCCAGAACAGGGGGTTAGCATGCTCCGGACAACTTGTGGGACTCCTAATTATGTAGCTCCTGAGGTACTCAGTCACAAGGGTTATAATGGCGCTCCAGCAGATGTTTGGTCCTGTGGAGTTATCCTCTATGTTTTACTTGCTGGATATCTTCCCTTTGACGAACTTGATCTAACTACGTTATACAGTAAGATTGAGAAAGCAGAGTTTTCATGCCCTCCTTGGTTTCCTGTGGAAGCAAAATCTTTAATACACAGAACTTTGGACCCAAATCCTGATCATCGTATAACCATTCAGCAGATTAGAAATGATGAGTGGTTTCAAAAGGACTACGTGCCTGTCAGTCTCCTCGAGTATGAAGATGTAAATCTGGATGATGTAAATGCTGCATTTGACAATGCTGAGGATCAGAGGACTAAGCAGCAATGTGAGAATGATGACATGGGCCCTCTAACTCTTAATGCATTCGATATGATAGTTTTATCTCAAGGCCTAAACCTTGCAACACTCTTTGATCGTGGACAGGACTCTATGTTGAACCAAACACGTTTCATTACTCAAAAGCCATCAAAGGTGGTTTTATCTAGTATGGAAGTTGTGGCACAATCAATGGGATTTAAGACGCATATTCGCAACTACAAGGTTTTTGAAATTGCTCCCACATTTTTCATGGTGGACATTCATAAAGCAGCTGGAGATGCAGGTGAATATAAGGAGTTTTACAAGAATTTTTCTAGCAACCTTGAGGATATCATCTGGAAACCGCCTCATGAAACAAGCAAATCATGGATCTCCAACACTAGAAGCAAAAGGCAGTAG 1284 0.4089 MVLRKVGKYEIGRTIGEGTFAKVKFAQNTETGESVAMKVLDRSTIIKHKMIDQIKREISIMKLVRHPYVVRLHEVLASRTKIYIILEFITGGELFDKIVSHGRLSESESRRYFQQLIDGVDCCHSKGVYHRDLKPENLLLDSQGNLKISDFGLSALPEQGVSMLRTTCGTPNYVAPEVLSHKGYNGAPADVWSCGVILYVLLAGYLPFDELDLTTLYSKIEKAEFSCPPWFPVEAKSLIHRTLDPNPDHRITIQQIRNDEWFQKDYVPVSLLEYEDVNLDDVNAAFDNAEDQRTKQQCENDDMGPLTLNAFDMIVLSQGLNLATLFDRGQDSMLNQTRFITQKPSKVVLSSMEVVAQSMGFKTHIRNYKVFEIAPTFFMVDIHKAAGDAGEYKEFYKNFSSNLEDIIWKPPHETSKSWISNTRSKRQ* 428
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g1025 427 Gene3D Phosphorylase Kinase; domain 1 2 88 - -
Apr9g1025 427 Gene3D Kinase associated domain 1, KA1 302 409 - -
Apr9g1025 427 ProSiteProfiles NAF domain profile. 303 327 IPR018451 GO:0007165
Apr9g1025 427 Pfam Protein kinase domain 9 262 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr9g1025 427 PANTHER NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE 2 424 - -
Apr9g1025 427 Pfam NAF domain 305 363 IPR004041 GO:0007165
Apr9g1025 427 PANTHER - 2 424 - -
Apr9g1025 427 ProSitePatterns Serine/Threonine protein kinases active-site signature. 128 140 IPR008271 GO:0004672|GO:0006468
Apr9g1025 427 Coils Coil 279 299 - -
Apr9g1025 427 ProSitePatterns Protein kinases ATP-binding region signature. 15 47 IPR017441 GO:0005524
Apr9g1025 427 CDD CIPK_C 309 405 - -
Apr9g1025 427 SUPERFAMILY Protein kinase-like (PK-like) 6 276 IPR011009 -
Apr9g1025 427 ProSiteProfiles Protein kinase domain profile. 9 262 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr9g1025 427 Gene3D Transferase(Phosphotransferase) domain 1 89 270 - -
Apr9g1025 427 SMART serkin_6 9 262 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g1025 Apr-Chr9 19562727 19568839 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr9g1025 1 370 CBL-interacting serine-threonine protein kinases AT4G24400 82.432 0.0 639
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Apr9g1025 Pkinase 1.3e-71 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g1025 - - gmx:100816735 773.852
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr9g1025 9 19562727 19568839 Apr9g1025 9 19562727 19568839 ECH