Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g1011 ATGCCTCACAGAGCCACTTACTTTTTCCCAAGGCAGTTTCCCGAAAGAGGCTTGGATGAATCTTCCAAGCAGAGATTAGATCACGAGAAGAGCAAAATCGTCAACTCCATAAAATCATCAGATAGTGCTTTTGGATTTGAAAGCGACGGGCCGAAAAAGCCGTCTACTACTCCCACTACCGCTGCCAAAGACGACGTCGTTTTCTCCTCTAGTAAACAATCCGCCGTCTCCGACCTCTTCACCGCCGGCGACAAGTTCCTAACCAAGCAGAAGCAAATTGCCGCGTTCTGCGATTGGTTGATAGATAAAAAGAAGGATCAGAACCGACCTAGTCACCATTTCAAACCCTATCCAAACGACGATGATGAGGAAGAGGAGGAGGAACGCGAGCTTCTGCTTCCTCCGGCGCCGGCGGCGAAAGATGCTGTTGACCGGAGCTTCGACCGGCAAGTTTCGCTGCCGCGGTTGTCGAGCGGGAGCAGCTATGCTGGAAGCTTGTTCACGTTGGATGGCACCGCCACTTTCTCTAGCGACGTAACCAAAGACGTCGAAACCTCGTCGTTTCAAGTCTCCACGACGAAAAGGCGCGAACAAGAAGAGGAAGAAGAAGAAAAAGAAAAACGCAAAAGCCTTCAGAAGTATAAAGAGAGCTACTACCTGCAACTGGCGTTAGCGAAGAGGCTCACTTGCTTTGCAAGCCTCGCCTCTGAGCCCGTTCTAACGCTCGACGCTGAAATCGAAACTTGGGACGCCGAATCCGTTTCGTATCGTCTATGGGTGAGTGGGTGCTTGTCGTACACGGACAAGATATCTGATGGTTTTTACAACATTTTGGGGATGAATCCGTATCTGTGGGTGATGTGCAATGACGTGGGGGAAGAAGGGAAGCGGTTACCGACTCTGATGGCGCTTAAGGCCGTTGAACCAAGCGAGACTTCTATAGAGGTGGCTCTTGTTGATTGGCACGAGGACTCTCGGCTTAAGGAACTTCAAGATAAAGCTCAAGAGTTGTATTCTGCTTCCGAGAACACATTGGTGCTGGTTGAAAAGCTTGGAAAACTCGTCGCCATATGTATGGGGGGTACGTTTCCGGTGGAGCAAGGAGATCTACACAAGCGATGGAAGTTGGTTAGTAAGAGGTTGAGGAACTTTCATCAATGTGTTGTGCTTCCCATTGGAAGCTTATCTAGTGGACTCTGCAGGCATCGCGCGATTCTCTTCAAGAGATTGGCGGATTACATAGGTTTGCCGTGTCGCATTGCTCGGGGTTGCAGGTACTGTGTTTCGGATCATAGATCCTCTTGCCTTGTGAAGATTAAGGATGACAGACAACTCTCAAGGGAATATGTAGTTGACCTGGTTGGGGATCCAGGAAATGTCCATGGGCCAGATTCATCCATCAATGGAGCTTATGTGTCTTCCATACCTTCCCCATTTCAAATTTCTCATTTGAAAGAGTCCCAATCACCATATGAAGATGCTGCAGCATGTTCTCAATCTATAAGTTTCAATCAACGTTCTATAATCCCGGAAAGTGACACTTATTCAGGCTGTGTACAGGAAGATCAACGAGTTAAAGGAACTGATATGCTGAAAAATAATAATGGCTTCTTTTATGCTTCAGTCGATCAAACTTCTGGAGGTGTTTCTGAAGCTCTTCATCCTGTCTCTGAAGCATCATTACACGAATACACCAGGCTCAGTAAAGATTCAGTTGTAGTACAAGACACTTCCAACAAGGAGATCATTGTAAAGGGAAGTTGTGGGGTACGAAGTAATTTTAAGCAATCTATTTTAAGTTCATCCAGCGAGTCAGAACAGGAACAGGTAGAGAATAGGCATGAAAGCCAGGGTGCTGGGAATGTTCCAAGATACTTGAATCTTGAGCCGTCGCTTGCAATGGACTGGCTTGAGATACCGTGGGATGATTTACGTATCAAAGAGCGAGTTGGTGCTGGATCATTTGGAACAGTGTACTGTGCTGACTGGCATGGATCAGATGTTGCTGTCAAGGTTTTAACAGTTCAGGATTTCCATGATGATCAGTTGAAAGAGTTTCTCAGAGAGGTTGCAATAATGAAACGTGTTCGTCATCCAAATGTGGTGCTCTTCATGGGTGCAGTTACTAAACGTCCCCATCTATCTATAGTAACAGAGTATTTGCCTAGGGGTAGTTTATTCCGCCTGATTCACCGGCCTTCATCTGGTGAAATTCTGGATCCAAGGAGAAGATTACGGATGACTTTAGACGTGGCTAAAGGGATCAATTATCTCCACTGTCTGAAGCCTCCAATTGTGCACTGGGATCTCAAAACCCCAAACCTTTTAGTGGACAGAAATTGGACTGTAAAGGTTTGCGATTTTGGATTGTCAAGATTTAAAGCGAACACTTTCTTATCATCAAAATCTGTTGCTGGAACACCTGAGTGGATGGCTCCAGAATTTCTTCGTGGAGAACCTTCAAATGAGAAGTCTGATGTTTACAGTTTTGGAGTTATTTTGTGGGAACTCGTGACCCTGCAGCAACCATGGAATGGAATGAGTCATGCCCAGGTGGTTGGAGCTGTCGCTTTCCAGAATAGGAGGCTTGCTATCCCTTCAAATGTCTCCCCGGCATTGGCCTCGCTCATGGAATCTTGTTGGGCTGATAACCCTGCTGATCGCCCATCTTTCGCCAGCATAGTTGAGTCGATAAAGAAGCTGCTTAAGTCACCAGCGGATGCGATAAAAATGGGTGGGACATGA 2745 0.4659 MPHRATYFFPRQFPERGLDESSKQRLDHEKSKIVNSIKSSDSAFGFESDGPKKPSTTPTTAAKDDVVFSSSKQSAVSDLFTAGDKFLTKQKQIAAFCDWLIDKKKDQNRPSHHFKPYPNDDDEEEEEERELLLPPAPAAKDAVDRSFDRQVSLPRLSSGSSYAGSLFTLDGTATFSSDVTKDVETSSFQVSTTKRREQEEEEEEKEKRKSLQKYKESYYLQLALAKRLTCFASLASEPVLTLDAEIETWDAESVSYRLWVSGCLSYTDKISDGFYNILGMNPYLWVMCNDVGEEGKRLPTLMALKAVEPSETSIEVALVDWHEDSRLKELQDKAQELYSASENTLVLVEKLGKLVAICMGGTFPVEQGDLHKRWKLVSKRLRNFHQCVVLPIGSLSSGLCRHRAILFKRLADYIGLPCRIARGCRYCVSDHRSSCLVKIKDDRQLSREYVVDLVGDPGNVHGPDSSINGAYVSSIPSPFQISHLKESQSPYEDAAACSQSISFNQRSIIPESDTYSGCVQEDQRVKGTDMLKNNNGFFYASVDQTSGGVSEALHPVSEASLHEYTRLSKDSVVVQDTSNKEIIVKGSCGVRSNFKQSILSSSSESEQEQVENRHESQGAGNVPRYLNLEPSLAMDWLEIPWDDLRIKERVGAGSFGTVYCADWHGSDVAVKVLTVQDFHDDQLKEFLREVAIMKRVRHPNVVLFMGAVTKRPHLSIVTEYLPRGSLFRLIHRPSSGEILDPRRRLRMTLDVAKGINYLHCLKPPIVHWDLKTPNLLVDRNWTVKVCDFGLSRFKANTFLSSKSVAGTPEWMAPEFLRGEPSNEKSDVYSFGVILWELVTLQQPWNGMSHAQVVGAVAFQNRRLAIPSNVSPALASLMESCWADNPADRPSFASIVESIKKLLKSPADAIKMGGT* 915
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g1011 914 MobiDBLite consensus disorder prediction 107 145 - -
Apr9g1011 914 Pfam Protein tyrosine and serine/threonine kinase 644 897 IPR001245 GO:0004672|GO:0006468
Apr9g1011 914 ProSiteProfiles Protein kinase domain profile. 644 902 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr9g1011 914 Coils Coil 194 217 - -
Apr9g1011 914 PRINTS Tyrosine kinase catalytic domain signature 718 731 IPR001245 GO:0004672|GO:0006468
Apr9g1011 914 PRINTS Tyrosine kinase catalytic domain signature 759 777 IPR001245 GO:0004672|GO:0006468
Apr9g1011 914 PRINTS Tyrosine kinase catalytic domain signature 825 847 IPR001245 GO:0004672|GO:0006468
Apr9g1011 914 PRINTS Tyrosine kinase catalytic domain signature 869 891 IPR001245 GO:0004672|GO:0006468
Apr9g1011 914 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 185 912 - -
Apr9g1011 914 Gene3D Transferase(Phosphotransferase) domain 1 723 910 - -
Apr9g1011 914 CDD STKc_MAP3K-like 650 898 - -
Apr9g1011 914 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 136 912 - -
Apr9g1011 914 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 185 912 - -
Apr9g1011 914 PANTHER SERINE/THREONINE-PROTEIN KINASE CTR1-LIKE ISOFORM X1 136 912 - -
Apr9g1011 914 MobiDBLite consensus disorder prediction 186 208 - -
Apr9g1011 914 SMART serkin_6 644 902 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr9g1011 914 SUPERFAMILY Protein kinase-like (PK-like) 621 896 IPR011009 -
Apr9g1011 914 MobiDBLite consensus disorder prediction 15 34 - -
Apr9g1011 914 MobiDBLite consensus disorder prediction 16 34 - -
Apr9g1011 914 MobiDBLite consensus disorder prediction 41 62 - -
Apr9g1011 914 ProSitePatterns Serine/Threonine protein kinases active-site signature. 765 777 IPR008271 GO:0004672|GO:0006468
Apr9g1011 914 Pfam Ethylene-responsive protein kinase Le-CTR1 251 460 - -
Apr9g1011 914 MobiDBLite consensus disorder prediction 193 208 - -
Apr9g1011 914 MobiDBLite consensus disorder prediction 601 622 - -
Apr9g1011 914 Gene3D Phosphorylase Kinase; domain 1 637 721 - -
Apr9g1011 914 ProSitePatterns Protein kinases ATP-binding region signature. 650 671 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g1011 Apr-Chr9 19271455 19279928 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr9g1011 1 913 MAP Kinase Kinase Kinase AT4G24480 57.262 0.0 1035
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-2 Apr9g1011 PK_Tyr_Ser-Thr 3.2e-65 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g1011 - - gmx:100786546 1506.89
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr9g1011 9 19271455 19279928 Apr9g1011 9 19271455 19279928 ECH
Apr9g1011 9 19271455 19279928 Apr5g0999 5 14619189 14627790 PCT