Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g1008 ATGAAGTTCAACCTGAAATGCTGTTCATATTTCATTACAGGTTTTCTTCTTGACCCTGCAAAATGTGGTGATCTGAGTTTGCTAGACAAACAAAGACTAGTCCGTGAGATTGCTGGACAGTCAACAGATGCCCCAAGTATGCTTCAGTCATTTACACGCAGGGAACTTCTAGAAATAATCTGTGCTGAATTAGGCAAAGAGAGGAAGTACACAGGATATACCAAGAGTCAAATGATAGAACATCTTCTGAAGATAATCTCTAAGAAATCCAACTTGCATGTCAATGGAAATACTCTTGCCCATTCTCCTGCCAAAAGTTGCATTGGATCTCAAAGGAAAAAACGACCTGCATCTCAGGATTTACATCCTGCTCCTCTGGGGAACACTAAAGAGGAAACAGTGAAAATCTTTTTGTGTCAGAATGTTGCATGCAAAGCTACATTGAATCCAGAAGACTCCTTTTGCAAGAGATGTTCTTGTTGTATATGTCATTGTTATGATGATAACAAGGATCCTAGTTTGTGGTTGACCTGCAGCCCCGATCTTCCCAGTGAGGAGTCATGTGGAATGTCATGCCATTTGCAATGTGCTTTGAGTAATCAAATGTCTGGAATTTTGAAGGGCAGTTGTGGTGTAAAGTTGGATGGAAGATTCTATTGTGTTTCTTGTGGAAAAATTAATGAATTAATGAAGACATGGCGAAAGCAATTATTGGTTGCCAAAGAAGCAAGAAGAACGGATATACTTTCTTTGCGAATATCCTTGGCCTATAGGATTCTTGTAGGAACAGAAGTCTACAAGGAAGTGCAGAAAATTGTAGAAACTGCTCTCAGATTACTGGAGAATGAAGTGGGATCACTCGATCATGTATATGCTAGGATGACCCGTGGGATTGTGAGCAGACTCTCATGCGGTGCTGAGGTTCAGAGACTGTGCTCTACTGCAGTGGAATGTTTTGATTCCAAGTTTTCTGACCTCTTCTCTAATTGTGTGGTAAAGAAAGATACGCCAACATGCTATATCCGTTTTGAAGAGTGTCTTCCTACATCAGTGGTCATTGTGCTGGAATACAAAGATAAACTTCTAAAAAATTTTCTAGGCTGCAGGCTTTGGTACCGAACATCAACAATTGACTACCCTGAACAACCCACCTTCATTGTCTTGAGGCCTGAGAAAAGATTCAAGTTGGAAAACCTCCATCCTTCAACTGAGTACTTTTGCAAGGCTTCCGTGTTCAGTAGCACAGGGATTTTGGGTGCTGCAGAAGCTAAATGGGTGACACCTTGTGAACCCACAAATTCTTCAAAAGTTATCAGACATGGTGGGAACCATTTAAGACGGTCCCCTCAGAGATCCCCAGGTACAGGTGTGGACATACGTGCACAAGACCAAATTAAGGTAACTGCTGAAATTCATCAAGTAGAATCAGCTAACTCTGACATTAAGTTATCAACCGGAGAACATCCTGCAAAACACCTCTTTTTGAACAACAGGAGCAGGTTCGAAGAGTTTCTCACCAAACCTCAATCAGTTGATCCTTTTTCTTATAAAACTTTTGCTGCAGTTTCACCTTCCACACCATCTAAATCCAATGAAATGAGGCAACTTACCAGTCTGAGTTATAGAAAGCGCTCTAAGGAAAATGATTATGAGTATTCTGTCAGGGTAGTCAAATGGTTAGAGCATCAAGGGCACATAGATGAAATCTTCAGAGTAAGATTTCTCACTTGGTTCAGCCTCAAGGCTACTCAGCAGGAGAGAAGGGTGGTTAGTGCTTTTGTTGATGCATTGATTGATGACCCAGCAAGCTTAGCAGATCAGCTCATACACACTTTCAGTGACGTGATATGTTGCGAGCAAAAATCTTAG 1869 0.412 MKFNLKCCSYFITGFLLDPAKCGDLSLLDKQRLVREIAGQSTDAPSMLQSFTRRELLEIICAELGKERKYTGYTKSQMIEHLLKIISKKSNLHVNGNTLAHSPAKSCIGSQRKKRPASQDLHPAPLGNTKEETVKIFLCQNVACKATLNPEDSFCKRCSCCICHCYDDNKDPSLWLTCSPDLPSEESCGMSCHLQCALSNQMSGILKGSCGVKLDGRFYCVSCGKINELMKTWRKQLLVAKEARRTDILSLRISLAYRILVGTEVYKEVQKIVETALRLLENEVGSLDHVYARMTRGIVSRLSCGAEVQRLCSTAVECFDSKFSDLFSNCVVKKDTPTCYIRFEECLPTSVVIVLEYKDKLLKNFLGCRLWYRTSTIDYPEQPTFIVLRPEKRFKLENLHPSTEYFCKASVFSSTGILGAAEAKWVTPCEPTNSSKVIRHGGNHLRRSPQRSPGTGVDIRAQDQIKVTAEIHQVESANSDIKLSTGEHPAKHLFLNNRSRFEEFLTKPQSVDPFSYKTFAAVSPSTPSKSNEMRQLTSLSYRKRSKENDYEYSVRVVKWLEHQGHIDEIFRVRFLTWFSLKATQQERRVVSAFVDALIDDPASLADQLIHTFSDVICCEQKS* 623
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g1008 622 MobiDBLite consensus disorder prediction 436 457 - -
Apr9g1008 622 Pfam PHD - plant homeodomain finger protein 139 257 IPR032881 -
Apr9g1008 622 PANTHER OS08G0220600 PROTEIN 9 622 - -
Apr9g1008 622 CDD PHD_VIN3_plant 159 223 - -
Apr9g1008 622 PANTHER VIN3-LIKE PROTEIN 2-RELATED 9 622 IPR044514 GO:0010048|GO:0040029
Apr9g1008 622 MobiDBLite consensus disorder prediction 103 127 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g1008 Apr-Chr9 19257976 19262674 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr9g1008 25 616 PHD Gene Family AT5G57380 33.604 1.15e-97 309
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g1008 - - gmx:100785502 1066.6
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr9g1008 9 19257976 19262674 Apr9g1008 9 19257976 19262674 ECH