Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g1000 ATGCGGGCGAGTAACATCGCAGAATCTGCAATCCATTTCGTGGAATCTCACTCTCATCACTCACTAACTCACTCACTCGCGCAGCAAAAGATGCAGAGTGGGACGCGCGCGGAGGCAGAGCGTCTGCTAGGAATCGCAGAAAAACTCTTACACACCCGCGATCTCATGGGGTCAAGAGAGTTCGCCGTCCTCGCTCAAGAAACCGAACCCCTTCTGGAAGGTTCCGACCAGATCCTCGCCATCGTCGATGTCCTACTCGCCGCAGACAAGCGCGTCAACAACCACCCCGACTGGTACGCCGTCCTCCAAGTCGATCGCCGCTCCGACAACCTTGAACTCATCAGAAAACAGTACCGCCGCCTCGCCCTCCTCCTCCACCCCGACAAAAACCGATTCTACTTCGCCGACCACGCCTTCAAACTCGTCGCCGACGCGTGGGCTCTACTCTCCGACTCTATAAAAAAATCCAACTACGATAAAGGCCTCTCCTTCTTCTCCCCCGTCGATTTGTCCATCCCGAGCTGGGTCCAGCAAGATAAATTACCCGTCCGCAGGACCGGCCCAGTGCCTGGGCCCGGGCCCGGGATTGGGCCCATCGATCGCAATAGCGCTTCCGCTAGAGACGAGATTTCGGCGGACGAGAATTCGCGGCAAAGAAACTCTTCTTTCTGGACTGCGTGTCCCTATTGTTACCGTTTGTACGAGTACCCGAGGATTTACGAGGGTTGTTGCTTGCGGTGCCAGAATTGTGAAAGGTCCTTTCACGGCGTTGCGGTGCCGTCGTTGCCGCCGCTGGTGCCGGGCCAGGACGCTTATTATTGCTGCTGGGGATTCTTCCCCATGGGGTTTGTTGCCGGGAGTTTTGATTCGCCGGAGAAAGAGGCTGCGGTGGGGGCGACTCCGCCTCTGCCACAGGCTTCTTCTTCGTTGCCGAATTGGATGCCGGCAAATGGCGGGGCCAGTGCGCAGGCAACGCCGGTGGCGGCCAGGGTGGCTAAAATGGGGGTTTCGAATGGGGTTGCTTCGGGGTCAAAGAAGCGAGGGAGGCCGAGGAAGCATCCTTTGCAATCCTGA 1074 0.5791 MRASNIAESAIHFVESHSHHSLTHSLAQQKMQSGTRAEAERLLGIAEKLLHTRDLMGSREFAVLAQETEPLLEGSDQILAIVDVLLAADKRVNNHPDWYAVLQVDRRSDNLELIRKQYRRLALLLHPDKNRFYFADHAFKLVADAWALLSDSIKKSNYDKGLSFFSPVDLSIPSWVQQDKLPVRRTGPVPGPGPGIGPIDRNSASARDEISADENSRQRNSSFWTACPYCYRLYEYPRIYEGCCLRCQNCERSFHGVAVPSLPPLVPGQDAYYCCWGFFPMGFVAGSFDSPEKEAAVGATPPLPQASSSLPNWMPANGGASAQATPVAARVAKMGVSNGVASGSKKRGRPRKHPLQS* 358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g1000 357 Gene3D DnaJ domain 86 166 IPR036869 -
Apr9g1000 357 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN 30 347 - -
Apr9g1000 357 SUPERFAMILY Chaperone J-domain 89 163 IPR036869 -
Apr9g1000 357 SMART dnaj_3 96 154 IPR001623 -
Apr9g1000 357 ProSiteProfiles dnaJ domain profile. 97 162 IPR001623 -
Apr9g1000 357 ProSitePatterns Nt-dnaJ domain signature. 139 158 IPR018253 -
Apr9g1000 357 MobiDBLite consensus disorder prediction 182 214 - -
Apr9g1000 357 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN 30 347 - -
Apr9g1000 357 MobiDBLite consensus disorder prediction 336 357 - -
Apr9g1000 357 Pfam DnaJ domain 97 159 IPR001623 -
Apr9g1000 357 PRINTS DnaJ domain signature 99 117 IPR001623 -
Apr9g1000 357 PRINTS DnaJ domain signature 118 133 IPR001623 -
Apr9g1000 357 PRINTS DnaJ domain signature 134 154 IPR001623 -
Apr9g1000 357 CDD DnaJ 97 151 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g1000 Apr-Chr9 19113622 19114942 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr9g1000 1 355 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 42.932 2.59e-100 299
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g1000 - - aprc:113846655 700.279
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr9g1000 9 19113622 19114942 Apr9g1000 9 19113622 19114942 ECH