Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g0995 ATGTTCTCAAAACTTCATCCACAACATCATCAACAACAACACCCTTTTCAATTCTCCAGAGAATGTGAAGATGATGACAGCCGGAGTAGTGGTCCTACTTTTGTTGCCGCGCAAAAACAAGTTTCCCCCAGCAGCGGCGATGGGGCCACAATTGAAGTAGTGCGTCGCCCCAGAGGCCGCCCTCCCGGCTCCAAGAACAAGCCCAAACCGCCTCTTATAATAACACGCGAGCCCGAGCCCGCGATGAGCCCATTCATCTTTGAAGTCCCGGCTGGAAGCGACGTCGTAGAGGCCCTAGCCCGGTTCAGTCACAGAAAGAACACGGGCCTGTGCGTTCTAACCGGTTCAGGAACCGTCGCTAACGTCACTCTCCGTCAACCTTCCGCCACACCCGGCGCCACCGTGACGTTCCACGGTCGCTTCGACATCCTCTCATTATCCGCGACGTTCCTCCTCCACGCCTCGCCGGCGAACCCCCATGGCTTCTCCATCTCCCTCGCCGGACCTCAGGGGCAGATCGTCGGCGGACTAGTCGTCGGCCGGTTACTTGCCGCCGGGACGGTGCTCGTGATTGCCGCGTCGTTCAACAATCCGTCGTATCACAGGCTGTCGTCGGAGGAGGACGCGCGGAACAATTCGGTTTCCGCCGGCGGCGATGCGCAGTCGCCGGCGGTGTCCAGTGGCGGTGCAGAGAGTGGGCACGTTCCGGCTGAGTCGTGTATTTATAGCAGTCATCTTCCCTCGGATGTGATTTGGGCTCCAACGGCTAGGCCCCCTTTCTGA 783 0.5926 MFSKLHPQHHQQQHPFQFSRECEDDDSRSSGPTFVAAQKQVSPSSGDGATIEVVRRPRGRPPGSKNKPKPPLIITREPEPAMSPFIFEVPAGSDVVEALARFSHRKNTGLCVLTGSGTVANVTLRQPSATPGATVTFHGRFDILSLSATFLLHASPANPHGFSISLAGPQGQIVGGLVVGRLLAAGTVLVIAASFNNPSYHRLSSEEDARNNSVSAGGDAQSPAVSSGGAESGHVPAESCIYSSHLPSDVIWAPTARPPF* 261
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g0995 260 CDD DUF296 84 195 IPR005175 -
Apr9g0995 260 MobiDBLite consensus disorder prediction 1 15 - -
Apr9g0995 260 PIRSF ESCAROLA 1 250 IPR014476 GO:0003680
Apr9g0995 260 ProSiteProfiles PPC domain profile profile. 79 216 IPR005175 -
Apr9g0995 260 MobiDBLite consensus disorder prediction 31 47 - -
Apr9g0995 260 Pfam Plants and Prokaryotes Conserved (PCC) domain 84 197 IPR005175 -
Apr9g0995 260 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 17-RELATED 8 258 - -
Apr9g0995 260 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 8 258 IPR014476 GO:0003680
Apr9g0995 260 MobiDBLite consensus disorder prediction 202 232 - -
Apr9g0995 260 SUPERFAMILY AF0104/ALDC/Ptd012-like 81 207 - -
Apr9g0995 260 Gene3D - 83 215 - -
Apr9g0995 260 MobiDBLite consensus disorder prediction 1 76 - -
Apr9g0995 260 MobiDBLite consensus disorder prediction 209 228 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g0995 Apr-Chr9 19064676 19065609 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr9g0995 47 259 AT-hook Motif Nuclear Localized (AHL) Family AT5G49700 61.504 2.40e-89 264
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g0995 - - gmx:100811053 347.436
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr9g0995 9 19064676 19065609 Apr9g0995 9 19064676 19065609 ECH
Apr9g0995 9 19064676 19065609 Apr1g0554 1 6729192 6730931 PCT