Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g0987 ATGGCACCCAGTTTTGATTGTGTTTCAAGCCTTCTCTGTGCGGAAGACAACAGTGTTTTTGACGAAAACGATTATGGGGGTTCGGTGGAGATTTTGGAGGACACATGGCAACATCATAGATATCATCGAAACCATAGTCAAAGTCAGCACTTTGGTGACCCAAATAATGGGTTGTTGCCGCCATTGCAGAGTGATGAGTGTTTGGCTCAAATGGTGGAAAAGGAATGCCATCACTTGCCTTGTGGTGATTATGTGAATAGGCTGAGAAGTGGGGATTTGGATTTTGGGGCCAGAAAGGAGGCCATTGATTGGATTGAAAAGGTCCGAGAGTACTTTGGTTTTGGACCCATCTGTGTATATCTATCCATAAACTATTTGGATCGCTTCCTTTCTGCTTATGAATTACCAAAGCAAAGAGCTTGGACAATGCAGTTGTTGGCTGTAGCATGCTTATCACTGGCAGCCAAAATAGAAGAGACTGAAGTTCCTTTGTGTCTTGATTTGCAGATAGCTGAATCTAAGTATGTATTTGAAGCTAAAACAATACAGAGAATGGAGCTTCTGATAATGAGCACATTGAGGTGGAGAATGCAAGCAATTACCCCTTTTTCCTTCATTGATTACTTCCTTTGCAAGATCAATGATGATCAAAGTCCAATAGGAGCTTCAATTTTGAAATCAGTCCAACTTATACTGCGTACTGTAAGAGGAATTGACTTCTTAGAGTTCAGACCCTCAGAGATTGCAGCAGCAGTGGCAATATCTGTGGTGGGGGAAGCTCAAACAGTTCACACTGAGAAAGCAATTTCTGTTCTGATTCAGCTTGTAGAAAAGGAGAGAGTTTTGAAGTGTATTAATATGATCAAAGAGCTGTCACCAAATCGTGGTTCTGCTAAGGACACTATTGCTTCTGTTTCTATTTCTGTACCTTGTGTGCCCCAAAGTCCAATAGGGGTGTTGGAAGCTGTATGCTTCAGCTACAAAAGTGATGACACAAATGCTGCTTCATGTGCAAATTCTTCACATAATAATAGCCCTGATGCTAAAAGGAGGAAGCTAAACAAATCCTTTGGAGAATAG 1080 0.4139 MAPSFDCVSSLLCAEDNSVFDENDYGGSVEILEDTWQHHRYHRNHSQSQHFGDPNNGLLPPLQSDECLAQMVEKECHHLPCGDYVNRLRSGDLDFGARKEAIDWIEKVREYFGFGPICVYLSINYLDRFLSAYELPKQRAWTMQLLAVACLSLAAKIEETEVPLCLDLQIAESKYVFEAKTIQRMELLIMSTLRWRMQAITPFSFIDYFLCKINDDQSPIGASILKSVQLILRTVRGIDFLEFRPSEIAAAVAISVVGEAQTVHTEKAISVLIQLVEKERVLKCINMIKELSPNRGSAKDTIASVSISVPCVPQSPIGVLEAVCFSYKSDDTNAASCANSSHNNSPDAKRRKLNKSFGE* 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g0987 359 Pfam Cyclin, N-terminal domain 68 197 IPR006671 -
Apr9g0987 359 Pfam Cyclin, C-terminal domain 200 297 IPR004367 -
Apr9g0987 359 MobiDBLite consensus disorder prediction 336 359 - -
Apr9g0987 359 PANTHER CYCLINS 1 353 IPR039361 -
Apr9g0987 359 Gene3D - 81 198 - -
Apr9g0987 359 SMART cyclin_7 103 191 IPR013763 -
Apr9g0987 359 SMART Cyclin_C_2 200 313 IPR004367 -
Apr9g0987 359 Gene3D - 68 286 - -
Apr9g0987 359 CDD CYCLIN 98 190 IPR013763 -
Apr9g0987 359 ProSitePatterns Cyclins signature. 98 129 IPR006671 -
Apr9g0987 359 PANTHER CARBOXY-TERMINAL DOMAIN CYCLIN 1 353 - -
Apr9g0987 359 MobiDBLite consensus disorder prediction 345 359 - -
Apr9g0987 359 SUPERFAMILY Cyclin-like 55 197 IPR036915 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g0987 Apr-Chr9 18958207 18960583 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr9g0987 25 338 Core Cell Cycle Gene Families AT2G22490 45.283 1.37e-88 269
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g0987 K18810 - gmx:100803873 563.148
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr9g0987 9 18958207 18960583 Apr9g0987 9 18958207 18960583 ECH