Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g0986 ATGGGAGAAGATTGTGGAACCTGGATACCGAAGCTGCATTTCGATTGGCAATCACCCAATTTGAGTTCCTTTGGTGCTCCCCTTGATGTGGGGAAGCAAAATGGTGTTTGTGCAGCTATGAATCTGGGTGCCAACATGGTCACAAGAAATGAGACAATGCCAGCTTATGTATCCTCTCTGCAACCGCATTCACAGTTAGGACATTCTGGTGAATCTCATGGGTGGTTTTATTGCTTGCCTCGTTTTCGACAGGGATTTACTATGCCTGCCCCAAACTTAACGGCTGAGGCAAAACTCCCTGCTGGCCATGTGAAAGATTCTAGGGAGGAAATTGTGCCAAATAGGGAAATGGGTTTTCCTCAAAAGCAATTCCTGGTCATCGATCAAACTGGCGATCAGACAACTCTAGTTTATAGTTCAAGGTTTGGGAGTCCCGTTGAGTGCCTTGGTTCCTGGGATTCAAAACTGCATGGTTCTAACAATTTGGATACTTGGAATGAATTGCCTTCATTAGGAAGAGATGTGAATCATGTGGTTGAACTTGGAACAACTTTGGATGATAAAGTTGATGAAAATCAAGGAACTGATGACATTGAAAGCGAGATGCATGAAGACACAGAGGAAATCAATGCATTGCTTTACTCTGACAGTGATGGTTATTCTACTGAGGATGATGATGAAGTTACTAGCACAGGACATTCACCCAGTACAATGACAACTCATGATAACCAGGAAGAACCCAATAGGGGGATTGCAGAAGAAGTTGCTAGCTCCGCTGGAAAGGCAAAGAAGCGGAAGCTATTGGATGAGACTTATGACGATGACGTGCAGTTCATGGACACTGCTAGTTCCCTGAATGGGAACAAACCCTTTGAAGTGGGAGATGATGCAGAGTCAAGATGCTCTAGTGGTGGAAACTGTAGTCAAGGATCAGGTGAAATGGGTTCATTGTCATGCAACAAAAGAATGAGAAAGGAAAAGATTCAAGATGTTTTGAGCATTCTACAATGCATAGTCCCTGGTGGGAAGGACAAGGATCCTATTGAGCTTCTTGATGAAGCCATACGTTGCTTGAAATCATTGAAACTCAAGAATAAACAAGGTACCTACCTATATTTGATGAAAAGTGGGATTGAGCAAGGGAAGTGGGAAATGGGAATCTCTAATCCCTTTGCTTTCATTATTGAGTGGGAACTGGTAGTTTTGATTTAA 1212 0.4299 MGEDCGTWIPKLHFDWQSPNLSSFGAPLDVGKQNGVCAAMNLGANMVTRNETMPAYVSSLQPHSQLGHSGESHGWFYCLPRFRQGFTMPAPNLTAEAKLPAGHVKDSREEIVPNREMGFPQKQFLVIDQTGDQTTLVYSSRFGSPVECLGSWDSKLHGSNNLDTWNELPSLGRDVNHVVELGTTLDDKVDENQGTDDIESEMHEDTEEINALLYSDSDGYSTEDDDEVTSTGHSPSTMTTHDNQEEPNRGIAEEVASSAGKAKKRKLLDETYDDDVQFMDTASSLNGNKPFEVGDDAESRCSSGGNCSQGSGEMGSLSCNKRMRKEKIQDVLSILQCIVPGGKDKDPIELLDEAIRCLKSLKLKNKQGTYLYLMKSGIEQGKWEMGISNPFAFIIEWELVVLI* 404
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g0986 403 MobiDBLite consensus disorder prediction 287 314 - -
Apr9g0986 403 PANTHER TRANSCRIPTION FACTOR BHLH145 1 367 - -
Apr9g0986 403 PANTHER TRANSCRIPTION FACTOR BHLH145 1 367 IPR037546 -
Apr9g0986 403 MobiDBLite consensus disorder prediction 231 245 - -
Apr9g0986 403 MobiDBLite consensus disorder prediction 216 249 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g0986 Apr-Chr9 18901555 18905436 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr9g0986 74 366 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G50010 34.007 2.32e-23 97.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g0986 - - gmx:100812109 566.614
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr9g0986 9 18901555 18905436 Apr9g0986 9 18901555 18905436 ECH
Apr9g0986 9 18901555 18905436 Apr5g1022 5 14821730 14826012 PCT