Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g0975 ATGAGAAAGAAAAGGAAAGAAACCGAGGCGGAACTCGAGATTTTAAAGTCGCATTACTCGCTGGAAGATTGTTCCAGGTGTAAAAAGAGGTGTAGCGATGACGGTGTAGCCACTGCTCCACCTTGGGGAACGTCGTTAATTGTGACGCCGTCAAGAGGTCTCAAGAGGAAGATAGGGTGCATTGATAGAGCCACACAAATGGGAAGAAGCAGAAGGATCGACGATGATTACGTCACCGGAGGAAACATGATCGGGCAAGGAAAGTTCGGGTGCGTGTGGCTGTGTCGCGCACGCGCCGGAGGAGGCGAGTACGCGTGTAAGACGCTGAGGAAGGGGGAGGAAACGGTGCACCGTGAGGTGGAGATAATGCAGCATCTGTCGGGGCACCCTGGTGTGGTCACTTTGGAGGCAGTGTATGAGGAAGCTGAGTGTTCGCATTTGGTTATGGAGTTGTGTTCTGGTGGAAGGTTGATCGATAAGATGAGGGAGGGTTCGTGTTCGGAGCACCAAGCTGCGGGTATAATCAAGGAAGTGATGTTGGTTGTTAAGTATTGTCATGATATGGGAGTGGTGCATAGGGATATTAAACCAGAGAATATTCTTCTTACAAAGTCTGGGAAAATCAAGCTTGCGGATTTTGGACTCGCCATGCGGATTTCCGAGGGTCAGAACTTGACGGGTTTGGCTGGGAGTCCTGCATATGTTGCACCAGAAGTGTTATTGGGTAGATATTCTGAGAAGGTGGATATATGGAGTGCTGGAGTGCTCCTGCATGCAATGTTGGTTGGTAGTCTTCCATTTAAAGGAGATTCACAAGAAGCAGTTTTTGAGGCTATTAAGAATGTCAAACTGGATTTCCAAACTGGAATGTGGGAATCCATATCTAAACCTGCACGAGATCTTGTTGGGAGAATGCTGACGAGGGATATTTCAGCAAGGATAACTGCTGATGAAGTACTTAGGCATCCGTGGATATTGTTCTACACAGAGCGTACATTAAAGATGCTGCCCATTAAATCAAAATTGAAACTCCAAAATGAAGCAGCTTGCCAGAAGTTTCTTGCTGCACCTGAATCTGGGTTAGTAGGAAGTGGGATAGATGATGGCTCCCTTAATAAGGTTTCAAGCGAGTTTTCATCCTCTGAAAGTGGCAATTCAGAATATCGTGATGACTGTGCGTGGATTGATGCACTTGCTACTGCTGTTTCACATGTGAGGATATCCGAAACAAAGAGGAGCAAGTTGTGGGGTCCCACCGTTCCAATTGATCAGCAAGGTTCATCTAACATGAAGGCTAATCTCTGTAAAGCATTCTGA 1317 0.4677 MRKKRKETEAELEILKSHYSLEDCSRCKKRCSDDGVATAPPWGTSLIVTPSRGLKRKIGCIDRATQMGRSRRIDDDYVTGGNMIGQGKFGCVWLCRARAGGGEYACKTLRKGEETVHREVEIMQHLSGHPGVVTLEAVYEEAECSHLVMELCSGGRLIDKMREGSCSEHQAAGIIKEVMLVVKYCHDMGVVHRDIKPENILLTKSGKIKLADFGLAMRISEGQNLTGLAGSPAYVAPEVLLGRYSEKVDIWSAGVLLHAMLVGSLPFKGDSQEAVFEAIKNVKLDFQTGMWESISKPARDLVGRMLTRDISARITADEVLRHPWILFYTERTLKMLPIKSKLKLQNEAACQKFLAAPESGLVGSGIDDGSLNKVSSEFSSSESGNSEYRDDCAWIDALATAVSHVRISETKRSKLWGPTVPIDQQGSSNMKANLCKAF* 439
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g0975 438 PANTHER SERINE/THREONINE-PROTEIN KINASE PEPKR2 11 431 - -
Apr9g0975 438 Gene3D Transferase(Phosphotransferase) domain 1 72 359 - -
Apr9g0975 438 ProSitePatterns Protein kinases ATP-binding region signature. 84 107 IPR017441 GO:0005524
Apr9g0975 438 SMART serkin_6 78 325 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr9g0975 438 PANTHER SERINE/THREONINE-PROTEIN KINASE 11 431 - -
Apr9g0975 438 SUPERFAMILY Protein kinase-like (PK-like) 73 356 IPR011009 -
Apr9g0975 438 ProSitePatterns Serine/Threonine protein kinases active-site signature. 190 202 IPR008271 GO:0004672|GO:0006468
Apr9g0975 438 CDD STKc_CAMK 81 324 - -
Apr9g0975 438 ProSiteProfiles Protein kinase domain profile. 78 325 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr9g0975 438 Pfam Protein kinase domain 82 325 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g0975 Apr-Chr9 18740035 18743665 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr9g0975 47 325 EF-hand Containing Proteins AT4G04720 42.414 2.11e-75 243
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Apr9g0975 Pkinase 1.5e-67 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g0975 - - gmx:100809977 697.197
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr9g0975 9 18740035 18743665 Apr9g0975 9 18740035 18743665 ECH
Apr9g0975 9 18740035 18743665 Apr5g0989 5 14457785 14461425 PCT