Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g0968 ATGGGCATCTACACGGAGTGCCCTGCACCTGCACCACCACCACCACCACTGCTTAATTTCGATCATGATCCTCCTTCTTCTTGCTCCCTTCTACTTCTTCTTCTCCTTATCTTGCCGCCGGTGACGGCACAGTTCCAATATTCGCCGCCGCCGCCGTTAGACCCATTCGCGAAATTGAGGTTCGACAGGACCATGGCCGTTGTCCTCGTTATCCTCGTCCTCGTTTTCTTTACATTGGGCTTCGTCTCCATCTACACGCGCCAATGCGCAGAGCGAAGGATCAGAGGGAGGCTCGACCTCGCCGTCGCGATCGCCAGCGGTAGCGAGCGCCGGCCATCGCGCGGGCTCGAATCGGCGATCATCGACACGTTCCCCATATTCGTGTACTCCGAGGTGAAAGGCCTCAAGATTGGAAAGGCGACGCTAGAATGCGCCGTCTGTCTGAACGAGTTCCGCGACGACGAAACGCTGCGTTTGATCCCCAAATGTAGCCACGTGTTCCACCCTGATTGCATCGACACTTGGTTGTTAAATCACAACACTTGCCCCGTTTGCCGTGCCAACCTCGTGCCCAAACCCAGCGACACTGCTTTTTCCGTTGCGGTTCAGATTCTAGATCCCGGTGGACCCGAACCAAATATATCCGTCCCGCAACCCGGTTATGATCCGAATTGGATTAACCCGGTGGATGGGAATGACGGGAACATGATAATAATGAACGAGACCCACAGTGTAAATTTAGATGATGAGAACCGGCCGGTTCGGTCCAGATCGACCGGGTTTGAGATTAGAACACTGTTCCCGCGTTCTTACTCGACCGGTCACTCGCTGGTTCAACTAGGTGAGAACTGCGAGCGGTTTACCCTGCGGTTGCCAGAGGAAGTGCGGAACCGGCTTGTTAGTTCGGCTTCAGCCACGTTGGACCGAACGAAGAGTTGCAGCGTGACGTGGCATCATGAGAACAGTGGGAGAAGCGGTTACAGGACGAGGAGCGTAGGGAGAAACTATTTGCATTACGAACGGTTGGACCGGTGGGGATTCATGTGGACCCCACCGATTTTGGGCCGGGCCGGTCCGGTGAGATCAACTAAGGACTCCAAGGCAATCGGGGTGATGGATGAAGCGCACGTGGGAGAGCGTTCTTCTGATCGCTTATTTTCCAAGCATTGA 1170 0.5496 MGIYTECPAPAPPPPPLLNFDHDPPSSCSLLLLLLLILPPVTAQFQYSPPPPLDPFAKLRFDRTMAVVLVILVLVFFTLGFVSIYTRQCAERRIRGRLDLAVAIASGSERRPSRGLESAIIDTFPIFVYSEVKGLKIGKATLECAVCLNEFRDDETLRLIPKCSHVFHPDCIDTWLLNHNTCPVCRANLVPKPSDTAFSVAVQILDPGGPEPNISVPQPGYDPNWINPVDGNDGNMIIMNETHSVNLDDENRPVRSRSTGFEIRTLFPRSYSTGHSLVQLGENCERFTLRLPEEVRNRLVSSASATLDRTKSCSVTWHHENSGRSGYRTRSVGRNYLHYERLDRWGFMWTPPILGRAGPVRSTKDSKAIGVMDEAHVGERSSDRLFSKH* 390
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g0968 389 SUPERFAMILY RING/U-box 143 195 - -
Apr9g0968 389 PANTHER RING-H2 FINGER PROTEIN ATL11 31 316 - -
Apr9g0968 389 PANTHER RING FINGER DOMAIN-CONTAINING 31 316 - -
Apr9g0968 389 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 104 191 IPR013083 -
Apr9g0968 389 ProSiteProfiles Zinc finger RING-type profile. 144 186 IPR001841 -
Apr9g0968 389 SMART ring_2 144 185 IPR001841 -
Apr9g0968 389 Pfam Ring finger domain 143 186 IPR001841 -
Apr9g0968 389 CDD RING-H2_PA-TM-RING 143 186 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g0968 Apr-Chr9 18598585 18599754 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr9g0968 21 380 Rapid Response to Elicitors AT3G05200 38.564 5.10e-68 218
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g0968 K10664 - gmx:100815982 452.595
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr9g0968 9 18598585 18599754 Apr5g0982 5 14393788 14395435 PCT