Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g0948 ATGGAGCGCTATGAGATTCTCAAAGATATTGGGTCTGGCAATTTTGCTGAGGCCAAGCTCGTTAGGGACAACTGCACCAACAAGTTCTTTGCTGTCAAGTTTATTGAGAGAGGCCAGAAGATTGATGAGAATGTCCAGAGGGAAATCATGAACCATAGATCATTGAAGCATCCCAATATTATTAGATTCAAAGAGATCCTGCTGACACCAACACATCTAGCCATAGTAATGGAGTATGCTGCTGGAGGAGAACTTTTTGAGAGGATATGCAGTGCTGGTAGATTCAGTGAAGATGAGGAAATCTGTCATAGAGATCTGAAACTTGAAAACACGCTCTTAGATGGAAGCACTGCACCACGAGTCAAAATTTGTGACTTTGGTTACTCGAAGTCATCAATATTGCATTCACAACCTAATTCTACGGTAGGAACTCCAGCTTACATTGCACCTGAGGTCCTTATGATGAAAGAATACGATGGAAAGATTGCAGATGTTTGGTCTTGTGGAGTCACCTTATATGTGATGGTAGTTGGGGCTTATCCTTTTGAAGACCCTGCAGATCCAAGAAACTTCAAAAAAACCATTGGTAAGATACTTAGTGTCCAGTACTCAATCCCTGATTACGTACGAGTTTCCATGGAATGCATACATCTTTTATCACAAATATTTGTGGCAAGCCCTGACAAGAGAATAACAATACCAGAAATTAAAAACCATCCATGGTTTTTGAAGAACTTACCAATAGAATTAATGGAAGGTGGAAGTTGGCAAATCAATGATGTGTATGATCCATCACAAAGTGTTGAGGAAGTTCTGTCTATTCTACAAGAGGCAAGAAAATGTCTTAAGGTTCCCAAGGTTGGCGGTCTTCTTACTGGTGGCAGCATGGACCTGGATGAGTTGGATAGTGATGAAGATCTGGAAGATGTAGAATCAAGCAGTGAATTTGTGTGCCCTCCTCTTTAA 966 0.4079 MERYEILKDIGSGNFAEAKLVRDNCTNKFFAVKFIERGQKIDENVQREIMNHRSLKHPNIIRFKEILLTPTHLAIVMEYAAGGELFERICSAGRFSEDEEICHRDLKLENTLLDGSTAPRVKICDFGYSKSSILHSQPNSTVGTPAYIAPEVLMMKEYDGKIADVWSCGVTLYVMVVGAYPFEDPADPRNFKKTIGKILSVQYSIPDYVRVSMECIHLLSQIFVASPDKRITIPEIKNHPWFLKNLPIELMEGGSWQINDVYDPSQSVEEVLSILQEARKCLKVPKVGGLLTGGSMDLDELDSDEDLEDVESSSEFVCPPL* 322
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g0948 321 Pfam Protein tyrosine and serine/threonine kinase 6 87 IPR001245 GO:0004672|GO:0006468
Apr9g0948 321 Pfam Protein kinase domain 98 242 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr9g0948 321 Gene3D Phosphorylase Kinase; domain 1 1 78 - -
Apr9g0948 321 ProSitePatterns Serine/Threonine protein kinases active-site signature. 101 113 IPR008271 GO:0004672|GO:0006468
Apr9g0948 321 SUPERFAMILY Protein kinase-like (PK-like) 2 251 IPR011009 -
Apr9g0948 321 ProSitePatterns Protein kinases ATP-binding region signature. 10 33 IPR017441 GO:0005524
Apr9g0948 321 MobiDBLite consensus disorder prediction 301 321 - -
Apr9g0948 321 Gene3D Transferase(Phosphotransferase) domain 1 79 250 - -
Apr9g0948 321 PANTHER SERINE/THREONINE-PROTEIN KINASE SAPK1 2 314 - -
Apr9g0948 321 SMART serkin_6 4 242 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr9g0948 321 PANTHER SERINE/THREONINE KINASE 2 314 - -
Apr9g0948 321 ProSiteProfiles Protein kinase domain profile. 4 242 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g0948 Apr-Chr9 18224541 18228302 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr9g0948 3 270 CBL-interacting serine-threonine protein kinases AT4G24400 35.811 1.75e-52 176
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_OST1L Apr9g0948 Pkinase 1.2e-35 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g0948 K14498 - gmx:100798091 550.821
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr9g0948 9 18224541 18228302 Apr9g0948 9 18224541 18228302 ECH