Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g0935 ATGGATAAATTATGCTGCTTTAAGTCTTCTTTCTCTCAGCTTGTAGCTGCACGTTCTTCATCCAGCACTGGTAAGGGGAAAAATCATGAAGGGTCAATAAAGTATGGCTTCACCTTAGTGAAAGGAAGAGCTAATCATCCAATGGAGGATTACCATGTTGCCAAGTTTAAGCAGATACAGGAGAAAGAATTGGGTTTATTTGCTATTTATGACGGCCACCTGGGAGATCGTGTGCCTGCGTACTTACAAAAACATTTGATTTCTAACATTCTAAAGGAGGTGTTTACTCTTACAGTTGAAGAATTTTGGGATAACCCTGCTGCATCTATATCAAAAGCATATCTGAGCACAGATCAGGAAATTCTTTCACATAGTTTTGATTTGGGGCATGGTGGATCAACAGCTGTAACTGCAATATTAATCAACGGGCAAAGATTATGGATAGCTAATGTCGGAGATTCACGGGCAGTTGTTTCAAGAAAAGGTCAAGCAGTGCAAATGACTACAGAACATGAACCCAACAGGGAACGAGGCAGCATTGAGAATAAAGGCGGTTTTGTCTCCTATGTGCCAGGTGATGTGCCAAGAGTAAATGGGCAACTAGCTGTTTCTCGTGCATTTGGAGACAAGAGCCTCAAGTCACATTTGCGATCAGACCCCGATGTACAAAGTACTGATGTAGATGTTGATATTGATATTCTAATCCTTGCAAGTGATGGACTTTGGAAGGTAATGCCTAATCAAGAGGCAGTCGATATTGCTAGAAGGATTAGAGACCCATTGAAAGCAGCTAAGCAATTAACAGCTGAAGCATTAAAAAGAGACAGTAAAGATGATATATCTTGCGTTGTGGTCAGATTTAGGTGTTGA 870 0.408 MDKLCCFKSSFSQLVAARSSSSTGKGKNHEGSIKYGFTLVKGRANHPMEDYHVAKFKQIQEKELGLFAIYDGHLGDRVPAYLQKHLISNILKEVFTLTVEEFWDNPAASISKAYLSTDQEILSHSFDLGHGGSTAVTAILINGQRLWIANVGDSRAVVSRKGQAVQMTTEHEPNRERGSIENKGGFVSYVPGDVPRVNGQLAVSRAFGDKSLKSHLRSDPDVQSTDVDVDIDILILASDGLWKVMPNQEAVDIARRIRDPLKAAKQLTAEALKRDSKDDISCVVVRFRC* 290
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g0935 289 CDD PP2Cc 33 287 IPR001932 -
Apr9g0935 289 ProSiteProfiles PPM-type phosphatase domain profile. 34 287 IPR001932 -
Apr9g0935 289 PANTHER PROTEIN PHOSPHATASE 2C 10-RELATED 1 288 - -
Apr9g0935 289 SUPERFAMILY PP2C-like 32 288 IPR036457 -
Apr9g0935 289 SMART PP2C_SIG_2 45 287 IPR001932 -
Apr9g0935 289 Pfam Protein phosphatase 2C 43 280 IPR001932 -
Apr9g0935 289 PANTHER PROTEIN PHOSPHATASE 2C 1 288 IPR015655 GO:0004722|GO:0006470
Apr9g0935 289 SMART PP2C_4 30 285 IPR001932 -
Apr9g0935 289 Gene3D - 29 289 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g0935 Apr-Chr9 17988621 17991969 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr9g0935 1 288 PP2C-type Phosphatase Gene Family AT1G22280 70.486 1.58e-145 408
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g0935 K17506 - gmx:100797292 488.419
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr9g0935 9 17988621 17991969 Apr9g0935 9 17988621 17991969 ECH