Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g0908 ATGGGAGAGCAAGGGGTCCTTCATCTTGAGGACACTGATCAAACACAGAGGTCCCAGTGGGTGCTTGATTCTCCCAACCCACCCCCTATTTGGAAGAAGCTATATAGTTCTCTCAAGGGAAACCTTTTGCCTCATGGGAACAAGTTCTGCTTTTCTTCATCTAAGAAGGACACTTTCCATGGACATGCTGTCTCATGCTTCCAGGGTTTGTTCCCAATACTTACTTGGTTGAGAGATTACAAGGCCTCCAAGTTCAAAGATGATCTCTTAGCTGGTTTAACTCTTGCAAGCCTTAGCATACCTCAGAGCATTGGGTATGCTAATTTAGCAAAAGTTGATCCTGAATATGGCCTGTATACCAGTGTTGTTCCTCCTCTTATTTATGCTATGATGGGAAGCTCAAGAGAAATTGCAATTGGACCTGTAGCTGTAGTGTCAATGTTGTTGTCCTCTCTGGTCCCTAAAGTGGAAGATCCTGTGGCTAATCCTCATGCCTATAGAAATCTTGTCTTCACTGTGACATTCTTCACTGGACTTTTTCAAACTGCATTCGGTGTTTTCAGGTTGGGTTTTCTTGTGGATTTTCTTTCACATGCTGCACTAGTTGGGTTCATGGCCGGCGCAGCGATCGTTATTGGTCTTCAGCAACTCAAAGGGTTGTTGGGGATTAGTCACTTTACCACCAAAACAGATGTAATATCAGTGTTGGCATCTGTTTATAAGTCACTACATCATCAAATTACTTCTGAAGAAAAATGGAACCCTCTGAATTTTGTTCTGGGGTGTTCATTCCTGATTTTCCTTCTAATTACCCGTTTTATTGGCAGAAGAAACAGAAAGTTTTTCTGGTTGCCTGCTATTTCTCCTCTTTTATCAGTTATACTTTCAACATTAATTGTGTATTTGTCAAGAGCTGATAACCATGGGGTTAATATAATAAAGCATGTCAAAGGAGGCTTGAATCCAAGTTCACTTCACCAGTTGCAATTGAATGGTCAACATGTTGGACAAGCAGCAAAAATTGGATTGGTTTGTGCAGTTATTGCACTCACTGAAGCAATAGCGGTTGGTAGATCTTTTGCTTCCATTAAGGGATACCATCTTGATGGGAACAAAGAAATGTTATCAATGGGAGTCATGAACATTGCAGGATCTTTAACTTCATGCTATGTGGCAACTGGTTCTTTCTCAAGGACTGCAGTGAATTTCAGTGCAGGATGTCAAACAGCGGTGTCAAATATTGTGATGGCTATTACTGTGGTTTTGTCCCTGGAATTATTTACAAGGCTTTTATACTACACCCCTGTGGCTATCCTTGCTTCTATAATCCTCTCTGCTCTTCCTGGATTAATTGACATAAGTGAGGCTTGTTATATATGGAAGGTTGACAAATTAGACTTTCTTGCTTGTATTGGTGCTTTCGTTGGTGTGTTGTTCGCATCCGTAGAGATTGGTCTTCTTGTTGCAGTGATAATCTCGTTTGCAAAGATACTAATACAATCAATTCGACCTGGAATAGAAGTTCTAGGTAGAGTTCCAAGAACAGAAGCCTTTTGTGATGTTACTCAATATCCAATGGCCATAAGCACTCCAGGGATCATAGTTATTCGCATAAGTTCTGGCTCACTCTGCTTTGCAAATGCTAATTTTGTTAGAGAAAGAATTCTCAAGTGGGTCACACAAGAAGAAGATGGCCTCAAAGAAACTACCAAGGGTCGAGTCCAAGCAGTAATCCTAGACATGACGAATCTGATGAATGTTGATACTTCCGGAATTCTAGCTCTGGAGGAACTTCACAAGAGGTTGCTTTCACGTGGGGTAGAACTAGCTATGGTCAACCCGAGGTGGCTAGTAATTCACAAGCTTAAGCTTGCACATTTTGTGGACAAAATTGGAAAAGAATGGGTTTTCCTCACAGTTGGAGAAGCCGTAGACGCATGTCTCTCTTCTAAAATTGCTAGAGACTGA 1968 0.4131 MGEQGVLHLEDTDQTQRSQWVLDSPNPPPIWKKLYSSLKGNLLPHGNKFCFSSSKKDTFHGHAVSCFQGLFPILTWLRDYKASKFKDDLLAGLTLASLSIPQSIGYANLAKVDPEYGLYTSVVPPLIYAMMGSSREIAIGPVAVVSMLLSSLVPKVEDPVANPHAYRNLVFTVTFFTGLFQTAFGVFRLGFLVDFLSHAALVGFMAGAAIVIGLQQLKGLLGISHFTTKTDVISVLASVYKSLHHQITSEEKWNPLNFVLGCSFLIFLLITRFIGRRNRKFFWLPAISPLLSVILSTLIVYLSRADNHGVNIIKHVKGGLNPSSLHQLQLNGQHVGQAAKIGLVCAVIALTEAIAVGRSFASIKGYHLDGNKEMLSMGVMNIAGSLTSCYVATGSFSRTAVNFSAGCQTAVSNIVMAITVVLSLELFTRLLYYTPVAILASIILSALPGLIDISEACYIWKVDKLDFLACIGAFVGVLFASVEIGLLVAVIISFAKILIQSIRPGIEVLGRVPRTEAFCDVTQYPMAISTPGIIVIRISSGSLCFANANFVRERILKWVTQEEDGLKETTKGRVQAVILDMTNLMNVDTSGILALEELHKRLLSRGVELAMVNPRWLVIHKLKLAHFVDKIGKEWVFLTVGEAVDACLSSKIARD* 656
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g0908 655 CDD STAS_SulP_like_sulfate_transporter 524 640 - -
Apr9g0908 655 PANTHER SLC26A/SULP TRANSPORTER-RELATED 9 653 - -
Apr9g0908 655 Coils Coil 654 655 - -
Apr9g0908 655 Pfam Sulfate permease family 85 471 IPR011547 GO:0016021
Apr9g0908 655 Pfam STAS domain 524 643 IPR002645 -
Apr9g0908 655 SUPERFAMILY SpoIIaa-like 530 647 IPR036513 -
Apr9g0908 655 TIGRFAM sulP: sulfate permease 72 643 IPR001902 GO:0015301|GO:0016020|GO:0055085
Apr9g0908 655 Gene3D STAS domain 503 650 IPR036513 -
Apr9g0908 655 PANTHER SULFATE TRANSPORTER 9 653 IPR001902 GO:0015301|GO:0016020|GO:0055085
Apr9g0908 655 ProSiteProfiles STAS domain profile. 540 647 IPR002645 -
Apr9g0908 655 ProSitePatterns SLC26A transporters signature. 114 135 IPR018045 GO:0008271|GO:0008272
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g0908 Apr-Chr9 17462767 17467535 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr9g0908 13 652 Inorganic Solute Cotransporters AT5G10180 63.863 0.0 849
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g0908 K17469 - gmx:100776591 1163.29
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr9g0908 9 17462767 17467535 Apr9g0908 9 17462767 17467535 ECH
Apr9g0908 9 17462767 17467535 Apr1g0120 1 1335266 1339654 PCT