Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g0892 ATGGCAGCTAATGCAGCCAAATATGTGGAGAATTGTGCGCTTTGCTTCAGCTGTAGTTGGAATGTTTTGTTACTCTCAGAGCTTGTCTTTCAACCAATTACTGGGGAAGTGGACTTGGTGGAAGATATTAATTTATACTGTTTTAAGTTTCTTCATTTGCCTTGGCGTCTTGCTCACAAAGATGCATACAGCGTGCTTTCATGGGGTGCTTTTGCAATTATGTCACTCGGTTTGGCAAGACAGACTCATTGTGGATTCGAGGTTGATCTCCTTTATTTTTTCTGTGGAGGTCTAATGGTACAACTCATGACAATAAAATTATGGTTAGTTATTGTTGGAGGAAGTTTCAGTTATTCATTGATCATTCTTAGTTCATCTTTGGATGCCCCACTTGGAAGTGTCATTCAAATGGATTCACCCCAAGCCAATTTTGGTATTGATGGTGATTTGGAAGACCCACTTGAAAACGTAGAATTCCATGACGCACCTATTAATAGTAATGCTTCGCAACTCTATTGCTATGATCATTCTTTTATGCTACTTGAATCAGCACGGCTTACTTGTTATGTACTACTTTCTCTTGTTTATGTAGATGCAATGCAGAAAGTGAATTATGGTATAACTATGTTTGAAATTGAATATGAAGATTGGGTTGAAGAGCAAGATAGACAGCATGGAGAACTGAAAAATGCGTTGCAAACTAATGCATCTGATATGCAGCTTGGTCTACTTGTTCAGAGTAGCTTGAACCACTACTCAAATCTTTATAGGATGAAAGTAGATGCTGCAAAGGTTGATGTCATTTATATAATCTCTGGTGTATGGAAACCATTAACAGAACGCTTTTTTCTTTGGATTGGAGGATCTCGCCCAAGTGAGCTTATAAAAATCATTGTACCACAGCTTGAGCGTTTGACTGAACAACAAATTATGAGCATTCAGAGTCTTTTCCATTCATCTCAGCAAACTGAAGAAGCTCTTACACAAGGGTTTGAGCGGCTCTATCATTCTCTGGTAGACGAAATAGCAACAGATCCGCTGGTTGTAGGAACCAACGAAGTTTTCAAACTCGAAACACTAGAATGTTTTGTAAATCAGGCAGATCTCCTTAGGCAAGAAACTCTGCTGCAAATGTCTCGCATCCTTACAATTGGTCAAGCTGCTCAAGGCTTGCTGGCTATGGGGGAATACTTTCATGGACTTCGCACACTTAGCTCATCATGGAGTACTCGTTCAAGAGATCCTGGCCACCCTACTCAACTATCAAATTAA 1272 0.3962 MAANAAKYVENCALCFSCSWNVLLLSELVFQPITGEVDLVEDINLYCFKFLHLPWRLAHKDAYSVLSWGAFAIMSLGLARQTHCGFEVDLLYFFCGGLMVQLMTIKLWLVIVGGSFSYSLIILSSSLDAPLGSVIQMDSPQANFGIDGDLEDPLENVEFHDAPINSNASQLYCYDHSFMLLESARLTCYVLLSLVYVDAMQKVNYGITMFEIEYEDWVEEQDRQHGELKNALQTNASDMQLGLLVQSSLNHYSNLYRMKVDAAKVDVIYIISGVWKPLTERFFLWIGGSRPSELIKIIVPQLERLTEQQIMSIQSLFHSSQQTEEALTQGFERLYHSLVDEIATDPLVVGTNEVFKLETLECFVNQADLLRQETLLQMSRILTIGQAAQGLLAMGEYFHGLRTLSSSWSTRSRDPGHPTQLSN* 424
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g0892 423 Pfam Seed dormancy control 226 299 IPR025422 GO:0006351|GO:0043565
Apr9g0892 423 ProSiteProfiles DOG1 domain profile. 207 411 IPR025422 GO:0006351|GO:0043565
Apr9g0892 423 PANTHER FACTOR TGA7, PUTATIVE-RELATED 195 415 - -
Apr9g0892 423 PANTHER TRANSCRIPTION FACTOR TGA9 195 415 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g0892 Apr-Chr9 17136594 17150035 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr9g0892 203 415 Calmodulin-binding Proteins AT1G77920 52.273 1.57e-76 241
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g0892 K14431 - gmx:100526976 276.174