Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g0870 ATGGCGGCTTCGGTTGACAACCGTCAATACGGTGGCCACATAAACGGTGTCGTTCGCGGTTGTGGGCACGACTTAAAACCACCTCTGCCTCTTGATTTACACTACGATTCCTCGAGCAGCGATGATGACGAAAACGACGACGCTTCGTACCTGAAAGAGCTAATACAAAAGGCAAACGCTGAGGTAGAGGCGTCAGTGTTGGACCCACGCGACGAGGGAACCGCGGATCAATGGATCCCACGGAACGGTACCATGGTCCGCCTCACAGGGAAGCACCCCTTCAACTCTGAACCACCCCTCCCACGCCTCATGCACCACGGTTTCATCACCCCGGTCCCACTCCACTACGTGCGCAACCACGGGCCTGTTCCCAAGGCCCGTTGGGAGGATTGGGCTGTCGAGGTAACAGGCCTCGTTAAACGGCCCACTCGTTTCACCATGGAGCGGCTCATCCGCGAGTTCCCCAGCCGCGAGTTCCCCGCCACTCTCGTCTGCGCCGGGAACCGCCGCAAGGAGCAGAACATGGTAAAACAAAGCGTCGGCTTCAATTGGGGCCCCGCGGCTGTCTCAACCTCGGTGTGGCGCGGCGTGCCTCTGCGGCACGTGTTAAAGCGGTGCGGGATCTACTCACGTGCGAAGGGTGCGTTGCACGTGTGCTTCGAGGGCGAGGAGGATCTACCTGGTGGTGGTGGTTCAAAGTATGGAACGAGTATTAAGCGGGAGTTTGCTATGGATCCTTCGCGTGATATCATATTGGCTTACATGCAAAACGACGAGGCTTTGACACCGGACCATGGGTTCCCCGTTCGCATGATTATACCCGGGTTTATTGGTGGCCGAATGGTTAAATGGCTGAAGCGCATTGTGGTCACTCCTGTTGAGTGTAACAATCATTACCATTTTAAGGATAATAGAGTACTCCCTTCTCACGTTTATGCAGAACTTGCCAACGAAGAAGCTTGGTGGTACAAGCCGGAATATATCATCAACGAGTTGAACATTAACTCAGTGATAACGACGCCGGGTCACGAGGAGATTCTGCCCATCAACTCATGGACTACGCAGAGGCCTTATGTACTGAGAGGTTACGCATATTCTGGGGGAGGAAGGAAAGTCACACGAGTTGAGGTAACATTGGACGGAGGAGAAACGTGGGACGTGTGCACAATTGACCATACAGAGAAACCCAACAAATATGGCAAGTACTGGTGCTGGTGCTTCTGGTCTCTGGAGGTGGAGGTCTTGGACCTCCTTGGAACCAAGGAGATTGCGGTCCGTGCCTGGGATGAGGGCCTCAACACCCAGCCTGAAAACCTCATTTGGAATGTTATGGGTATGATGAACAATTGCTGGTTCAGGGTGAAAACGAACGTGTGCAAGCCTCACAAGGGTGAGATTGGCATTGTGTTTGAGCACCCAACCCAACCAGGGAACAAGCCCGGTGGGTGGATGGCAAAGGAGAGACACTTGGAGATATCACAAGACCCAACCCCAGCCATGAAGAAGAGTGTCTCCACACCATTCATGAATACAACCTCAAAAACGTTCTCCCTCTCCGAAGTTAAAAAACATAACACCCCCGATTCCGCATGGATCATCGTCCATGGCCATGTCTATGATTGCACCGACTTCCTCAAAGACCACCCCGGCGGTACCGACAGCATCCTCATCAATGCCGGCACTGACTGCACCGAAGAGTTCGACGCCATCCATTCCGACAAAGCCAAGAAAATGCTTGAGGATTACCGAATTGGGGAGCTCATCACCACGGGTTCAGGCTACTCCTCAGACTCATCACCCAATAACTCCATGCATGGAAACTCCGAAACCATTCATTTGGCCCCCATTAAGGAAATCACCACAACATCATCTTGCAGCGTGGCTCTGAACCCACGCGAGAAGATTCCATGTAAGCTCGTGTCCAAAACCTCCATTTCGCGGGACGTGAGGCTCTTCCGTTTTGCACTGCCCTCAGAGGACCAACTCTTGGGGTTACCAGTGGGGAAGCACATTTTCCTATGTGCAACCATCGATGGCAAGCTATGCATGCGCGCCTACACTCCATCTAGTGCTGCAGACGCAGTGGGGTACTTTGAACTAGTCATCAAGGTTTACTTCAAAGGTGTGCACCCCAAGTTCCCGAATGGAGGACTCATGTCTCAGCATTTGGACTCACGCCCTATTGGGTCTATTTTGGACGTTAAAGGGCCATTGGGTCACATAGAGTACAATGGAAGAGGCAATTTTTCGGTTCATGGGAAACATAGATATGCTAAGAGGCTAGCCATGTTGGCTGGTGGGACCGGGATCACACCCATTTACCAAGTGGCACAAGCGATTTTGAGGGACCCTGAGGACCACACTGAAATGCATGTGGTGTATGCGAACCGCACTGAGGATGATATATTGTTGAGGGAAGAGATGGATGCGTGGGCGAAGGATTATCCTGAACGGTTTAAGGTTTGGTATGTTGTGGAAACCGCCAAGGAAGAGTGGGAATATAGTGTGGGTTTCATCACGGAGGGTATCATGAAGGAGCATCTTCCACAACCTTCGGGGGACACGTTGGCTTTGACTTGTGGGCCACCACCCATGATTCAGTTCGCGGTGCAACCCAACTTGGAGAAGATGGGGTATGACATTAAGAATGATTTGTTGTTGTTTTAG 2667 0.5212 MAASVDNRQYGGHINGVVRGCGHDLKPPLPLDLHYDSSSSDDDENDDASYLKELIQKANAEVEASVLDPRDEGTADQWIPRNGTMVRLTGKHPFNSEPPLPRLMHHGFITPVPLHYVRNHGPVPKARWEDWAVEVTGLVKRPTRFTMERLIREFPSREFPATLVCAGNRRKEQNMVKQSVGFNWGPAAVSTSVWRGVPLRHVLKRCGIYSRAKGALHVCFEGEEDLPGGGGSKYGTSIKREFAMDPSRDIILAYMQNDEALTPDHGFPVRMIIPGFIGGRMVKWLKRIVVTPVECNNHYHFKDNRVLPSHVYAELANEEAWWYKPEYIINELNINSVITTPGHEEILPINSWTTQRPYVLRGYAYSGGGRKVTRVEVTLDGGETWDVCTIDHTEKPNKYGKYWCWCFWSLEVEVLDLLGTKEIAVRAWDEGLNTQPENLIWNVMGMMNNCWFRVKTNVCKPHKGEIGIVFEHPTQPGNKPGGWMAKERHLEISQDPTPAMKKSVSTPFMNTTSKTFSLSEVKKHNTPDSAWIIVHGHVYDCTDFLKDHPGGTDSILINAGTDCTEEFDAIHSDKAKKMLEDYRIGELITTGSGYSSDSSPNNSMHGNSETIHLAPIKEITTTSSCSVALNPREKIPCKLVSKTSISRDVRLFRFALPSEDQLLGLPVGKHIFLCATIDGKLCMRAYTPSSAADAVGYFELVIKVYFKGVHPKFPNGGLMSQHLDSRPIGSILDVKGPLGHIEYNGRGNFSVHGKHRYAKRLAMLAGGTGITPIYQVAQAILRDPEDHTEMHVVYANRTEDDILLREEMDAWAKDYPERFKVWYVVETAKEEWEYSVGFITEGIMKEHLPQPSGDTLALTCGPPPMIQFAVQPNLEKMGYDIKNDLLLF* 889
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g0870 888 PANTHER NITRATE REDUCTASE [NADH] 2 42 888 - -
Apr9g0870 888 ProSitePatterns Eukaryotic molybdopterin oxidoreductases signature. 137 172 IPR022407 GO:0043546
Apr9g0870 888 Gene3D Translation factors 624 738 - -
Apr9g0870 888 Pfam Oxidoreductase molybdopterin binding domain 120 299 IPR000572 -
Apr9g0870 888 ProSitePatterns Cytochrome b5 family, heme-binding domain signature. 544 551 IPR018506 GO:0020037
Apr9g0870 888 CDD cyt_b5_reduct_like 637 883 - -
Apr9g0870 888 PIRSF Nitr_rd_NADH 21 887 IPR012137 GO:0006809|GO:0042128|GO:0050464
Apr9g0870 888 Gene3D - 509 590 IPR036400 -
Apr9g0870 888 ProSiteProfiles Ferredoxin reductase-type FAD binding domain profile. 632 744 IPR017927 GO:0016491
Apr9g0870 888 Pfam Oxidoreductase NAD-binding domain 763 870 IPR001433 GO:0016491
Apr9g0870 888 SUPERFAMILY E set domains 331 458 IPR014756 -
Apr9g0870 888 CDD eukary_NR_Moco 71 456 - -
Apr9g0870 888 SUPERFAMILY Ferredoxin reductase-like, C-terminal NADP-linked domain 732 882 IPR039261 -
Apr9g0870 888 Gene3D - 739 883 IPR039261 -
Apr9g0870 888 Pfam Cytochrome b5-like Heme/Steroid binding domain 517 587 IPR001199 -
Apr9g0870 888 PRINTS Cytochrome B5 reductase signature 663 674 - -
Apr9g0870 888 PRINTS Cytochrome B5 reductase signature 684 691 - -
Apr9g0870 888 PRINTS Cytochrome B5 reductase signature 729 743 - -
Apr9g0870 888 PRINTS Cytochrome B5 reductase signature 762 781 - -
Apr9g0870 888 PRINTS Cytochrome B5 reductase signature 800 811 - -
Apr9g0870 888 PRINTS Cytochrome B5 reductase signature 856 864 - -
Apr9g0870 888 PRINTS Eukaryotic molybdopterin domain signature 86 100 IPR008335 GO:0016491
Apr9g0870 888 PRINTS Eukaryotic molybdopterin domain signature 108 124 IPR008335 GO:0016491
Apr9g0870 888 PRINTS Eukaryotic molybdopterin domain signature 161 172 IPR008335 GO:0016491
Apr9g0870 888 PRINTS Eukaryotic molybdopterin domain signature 172 184 IPR008335 GO:0016491
Apr9g0870 888 PRINTS Eukaryotic molybdopterin domain signature 187 202 IPR008335 GO:0016491
Apr9g0870 888 PRINTS Eukaryotic molybdopterin domain signature 245 261 IPR008335 GO:0016491
Apr9g0870 888 PRINTS Eukaryotic molybdopterin domain signature 262 275 IPR008335 GO:0016491
Apr9g0870 888 PRINTS Eukaryotic molybdopterin domain signature 278 291 IPR008335 GO:0016491
Apr9g0870 888 PRINTS Eukaryotic molybdopterin domain signature 329 341 IPR008335 GO:0016491
Apr9g0870 888 PRINTS Eukaryotic molybdopterin domain signature 360 374 IPR008335 GO:0016491
Apr9g0870 888 PRINTS Eukaryotic molybdopterin domain signature 374 386 IPR008335 GO:0016491
Apr9g0870 888 PRINTS Eukaryotic molybdopterin domain signature 401 411 IPR008335 GO:0016491
Apr9g0870 888 PRINTS Eukaryotic molybdopterin domain signature 426 438 IPR008335 GO:0016491
Apr9g0870 888 PRINTS Eukaryotic molybdopterin domain signature 439 452 IPR008335 GO:0016491
Apr9g0870 888 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 547 557 IPR001709 GO:0016491
Apr9g0870 888 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 684 691 IPR001709 GO:0016491
Apr9g0870 888 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 762 781 IPR001709 GO:0016491
Apr9g0870 888 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 788 797 IPR001709 GO:0016491
Apr9g0870 888 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 800 811 IPR001709 GO:0016491
Apr9g0870 888 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 832 848 IPR001709 GO:0016491
Apr9g0870 888 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 856 864 IPR001709 GO:0016491
Apr9g0870 888 SUPERFAMILY Oxidoreductase molybdopterin-binding domain 68 329 IPR036374 -
Apr9g0870 888 SUPERFAMILY Cytochrome b5-like heme/steroid binding domain 511 589 IPR036400 -
Apr9g0870 888 SMART Cyt_b5_2 516 588 IPR001199 -
Apr9g0870 888 Pfam Mo-co oxidoreductase dimerisation domain 327 458 IPR005066 GO:0016491|GO:0030151
Apr9g0870 888 Pfam Oxidoreductase FAD-binding domain 637 743 IPR008333 -
Apr9g0870 888 Gene3D - 331 505 - -
Apr9g0870 888 PRINTS Cytochrome B5 signature 538 548 IPR001199 -
Apr9g0870 888 PRINTS Cytochrome B5 signature 548 562 IPR001199 -
Apr9g0870 888 PRINTS Cytochrome B5 signature 563 570 IPR001199 -
Apr9g0870 888 PRINTS Cytochrome B5 signature 575 587 IPR001199 -
Apr9g0870 888 PANTHER NADH-CYTOCHROME B5 REDUCTASE 42 888 IPR001834 GO:0016491
Apr9g0870 888 SUPERFAMILY Riboflavin synthase domain-like 625 744 IPR017938 -
Apr9g0870 888 ProSiteProfiles Cytochrome b5 family, heme-binding domain profile. 513 588 IPR001199 -
Apr9g0870 888 Gene3D - 70 321 IPR036374 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g0870 Apr-Chr9 16745289 16750086 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr9g0870 619 879 NADPH P450 reductases AT5G17770 41.825 2.89e-57 196
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g0870 K10534 - gmx:100813471 1597.79