Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g0869 ATGAATCACCTACCTCGAATATTCGCCCATAGAAACCAATCCCCGAAGAGCACCATGGATCCCAAGACCAAGACGCGAAGAAAACAACCCAAGCTAGAGCGTCGAAACGCTGCCAAACACTTCGAATACGACGCTGGATCGTCGTCGTCTACGTCGTCACACGACTCGTCGTTGCTCTACACGCGATCCATGGACTTCTACGATCGAACCAGCTTCCGAATCGAAGGTGTGGAGGGCGAGTTCGACCGGATTTGCCAGAGCCTCGGGCTCTCCGGCCTGGAGGACTTCACCATTCCGGCGGCGGCGTGGGAGGCCATGAAGGTTCGGTCCTCGTCCGACATCTTGCCGCGGCTGAAGCACGGCGATTTCGACGGAGAAGTGAAGGAGAAGGAGGAAGTTGGAGTGACGGAGTGTGAGGTTGAGGCTAGGGTTCCGGTTAGGGGTTTTGATGAGTGTGTTCCGGCGGAGACTAGTGGTTGTTGCAACGGTGGCGGTGGGATTAAGGGTTTTCGGCCTCCGATGCTTAAGCCGCCGCCGGGGATTAGGGTTTCGGTGGTGGATAGCACGTGTTCCACGTGGGATTTGTTGAGGGATTTTGCTCCGAAAGGGGAAGGAGGGAAGGGGAGTTACGTGGAGTTGGGTGGTTCGGATGATGGTGGACGAGAAGAGAAGGAAGAGGAAGAGAAAGAAGAAGAAGAAGAAGAAGAAGAGGAGGAGGAGGAGGAGGAAAATGCGGCGAGGTATGCAGAGATTGTTGGTGAGTTTTCGGGGTCGTGTTCGTTTACTACGTCGAATGAAGATGATTCTTCTAGTACTACTACGGATCCCAGGTCCAATAATATATCTCCAAATGGGAGGATCAAGCGTGTTATTACTCCTGGTAACTGGCAGAAGGGCCATCTTTTGGGGCGTGGTTCGTTTGGTTCTGTCTATGAAGGGATTTCTGAAGATGGATTCTTTTTTGCTGTAAAAGAAGTTTCACTGCTTGATCAAGGGAATCAGGGAAAGCAAAGTGTATATCAACTGGAACAGGAAATTGCTCTTTTGAGTCAGTTTGAACATGAGAATATAGTTCAATACTTTGGCACTGAAATGGATGAATCAAATCTGTATATCTTTCTTGAGTTTGTAACCAAAGGTTCCCTTCGAGACCTCTACCAGATATATAATCTTCGAGATTCTCAAGTATCTGCCTATACAAGACAGATTTTACATGGTTTAAAATATCTTCATGATCGAAATATTGTTCACAGGGATATTAAATGTGCAAATATTTTGGTGGATGCAAATGGATCTGTTAAGCTTGCAGATTTTGGATTGGCAAAGGCGACCAAATTGAATGATGTTAAATCATGCAAAGGAACAGCATACTGGATGGCCCCAGAGGTTGTAAAAGGAAAAAATAAAGGTTACGGGCTTCCGGCTGATATTTGGAGTCTGGGATGCACTGTGTTGGAGATGCTAACGGGCAAAATTCCATATTCTCATTTGGAATGTATGCAGGCATTGTTTAGAATTGGAAGAGGTGAGCCACCGCCTGTGCCAGATTCTCTTTCAAGAGATGCACGGGATTTTATACTGCAGTGTCTCAAAGTTAATCCAGATGAACGTTCCACTGCTGCTCAACTCTTAAACCATACCTTTGTCCAAAGGCCACTTTCCCAGTCATCTGGCTCTGCATCTCCTTATATCCGAAGGGGTTAA 1704 0.473 MNHLPRIFAHRNQSPKSTMDPKTKTRRKQPKLERRNAAKHFEYDAGSSSSTSSHDSSLLYTRSMDFYDRTSFRIEGVEGEFDRICQSLGLSGLEDFTIPAAAWEAMKVRSSSDILPRLKHGDFDGEVKEKEEVGVTECEVEARVPVRGFDECVPAETSGCCNGGGGIKGFRPPMLKPPPGIRVSVVDSTCSTWDLLRDFAPKGEGGKGSYVELGGSDDGGREEKEEEEKEEEEEEEEEEEEEENAARYAEIVGEFSGSCSFTTSNEDDSSSTTTDPRSNNISPNGRIKRVITPGNWQKGHLLGRGSFGSVYEGISEDGFFFAVKEVSLLDQGNQGKQSVYQLEQEIALLSQFEHENIVQYFGTEMDESNLYIFLEFVTKGSLRDLYQIYNLRDSQVSAYTRQILHGLKYLHDRNIVHRDIKCANILVDANGSVKLADFGLAKATKLNDVKSCKGTAYWMAPEVVKGKNKGYGLPADIWSLGCTVLEMLTGKIPYSHLECMQALFRIGRGEPPPVPDSLSRDARDFILQCLKVNPDERSTAAQLLNHTFVQRPLSQSSGSASPYIRRG* 568
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g0869 567 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 67 561 - -
Apr9g0869 567 ProSitePatterns Serine/Threonine protein kinases active-site signature. 415 427 IPR008271 GO:0004672|GO:0006468
Apr9g0869 567 MobiDBLite consensus disorder prediction 257 286 - -
Apr9g0869 567 Pfam Protein kinase domain 297 549 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr9g0869 567 PANTHER MAP KINASE KINASE KINASE-LIKE PROTEIN 67 561 - -
Apr9g0869 567 ProSiteProfiles Protein kinase domain profile. 296 549 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr9g0869 567 MobiDBLite consensus disorder prediction 1 56 - -
Apr9g0869 567 MobiDBLite consensus disorder prediction 257 289 - -
Apr9g0869 567 SMART serkin_6 296 549 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr9g0869 567 MobiDBLite consensus disorder prediction 204 245 - -
Apr9g0869 567 Gene3D Transferase(Phosphotransferase) domain 1 294 562 - -
Apr9g0869 567 SUPERFAMILY Protein kinase-like (PK-like) 279 553 IPR011009 -
Apr9g0869 567 MobiDBLite consensus disorder prediction 223 245 - -
Apr9g0869 567 Coils Coil 217 251 - -
Apr9g0869 567 ProSitePatterns Protein kinases ATP-binding region signature. 302 324 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g0869 Apr-Chr9 16704062 16716324 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr9g0869 167 553 MAP Kinase Kinase Kinase AT4G08500 63.660 1.63e-152 449
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Apr9g0869 Pkinase 1.9e-69 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g0869 K13414 - gmx:100804388 819.305
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr9g0869 9 16704062 16716324 Apr9g0869 9 16704062 16716324 ECH