Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g0860 ATGGTCAAGACAGAAAACAAAGTCCAGCCAGAGCCATCAAAGCCAACGTTGAGACCTTTACCTTCATCACCGGCATCAAATGAGAATAAGAAGAAGAAATACAAAGGGGTGAGAATGAGGAGTTGGGGTTCCTGGGTATCAGAAATTAGAGCACCAAACCAAAAAACAAGAATATGGTTGGGATCTTATTCAACTGCTGAAGCAGCAGCAAGAGCCTATGATGCTGCACTTCTATGCCTTAAAGGTTCCTCAGCAAACCTGAACTTCCCTTCAAGTTCTTCTCATTACATTCCTCAGGAAACTGTTATGTCCCCCAAATCCATCCAAAGAGTGGCTGCAGCTGCTGCTAATAGTTTTGTGGACAACAACAATAATGCTATTGCTAGCACCCCACCTTCTCCACCTCTTGCTTCAACCTCATCTTCTTCATTGGTCTCATCCCCTTCATTGTCTTCTTCTCCTTCAGATCATATAGAAGATGATGTTTCACTGCTTTCACCTTTTGAGGCCTACACTACTACTAGCTGTGAACAACCACATGCATCAATGGCTATGATGGAATCTTGGTATGGCCTTGATGGCTTACAATCACCAAAATATGTCGATCAAATGCTAAGTGGGGCATTTTTTGATATTGATTCAACACAGCTGCTTGATGATCTGTATGAAGAAAGTGGTGACATTCGTTTGTGGAGTTTCTGCTAA 705 0.4241 MVKTENKVQPEPSKPTLRPLPSSPASNENKKKKYKGVRMRSWGSWVSEIRAPNQKTRIWLGSYSTAEAAARAYDAALLCLKGSSANLNFPSSSSHYIPQETVMSPKSIQRVAAAAANSFVDNNNNAIASTPPSPPLASTSSSSLVSSPSLSSSPSDHIEDDVSLLSPFEAYTTTSCEQPHASMAMMESWYGLDGLQSPKYVDQMLSGAFFDIDSTQLLDDLYEESGDIRLWSFC* 235
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g0860 234 PRINTS Ethylene responsive element binding protein signature 34 45 IPR001471 GO:0003700|GO:0006355
Apr9g0860 234 PRINTS Ethylene responsive element binding protein signature 56 72 IPR001471 GO:0003700|GO:0006355
Apr9g0860 234 ProSiteProfiles AP2/ERF domain profile. 33 90 IPR001471 GO:0003700|GO:0006355
Apr9g0860 234 MobiDBLite consensus disorder prediction 1 36 - -
Apr9g0860 234 Pfam AP2 domain 33 82 IPR001471 GO:0003700|GO:0006355
Apr9g0860 234 SMART rav1_2 33 96 IPR001471 GO:0003700|GO:0006355
Apr9g0860 234 Gene3D AP2/ERF domain 32 91 IPR036955 GO:0003700|GO:0006355
Apr9g0860 234 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 23 234 - -
Apr9g0860 234 SUPERFAMILY DNA-binding domain 33 91 IPR016177 GO:0003677
Apr9g0860 234 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF014 23 234 - -
Apr9g0860 234 CDD AP2 32 92 IPR001471 GO:0003700|GO:0006355
Apr9g0860 234 MobiDBLite consensus disorder prediction 125 158 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g0860 Apr-Chr9 16518900 16519604 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr9g0860 34 233 AP2-EREBP Transcription Factor Family AT1G21910 50.000 2.97e-51 164
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-ERF Apr9g0860 AP2 4.9e-12 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g0860 - - gmx:100813313 310.071
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr9g0860 9 16518900 16519604 Apr9g0860 9 16518900 16519604 ECH