Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g0856 ATGCCATGGATTCTGGTTTTAGCACTTTGTGCTTCCTCAACAATTGTTATTCTTGGGGAAACCAATGAACGTCGTGACAGGAAGCTTGCTAATATTGATCACTCAGATCTGGTAAGCATTGATTGTGGGGTAAATGAGAGTTACATTGACAGGACGACCAACATGCAATATCAAGCAGATGAAATTCAATTTGGTAAAATTTACAATGTATCTTGGAATTACAACTTTGAGTATGTAAGTCAGATTGAGAAGCAGCTAAACACATTGAGAAGCTTTCCAGATGGGAAAAGGAATTGCTATACCTTGGAACTTAAACAGGGAAAGAACAAGAAATATATGATGAGGGCATACCTTGCATATGGAAACTATGACAACAAAGAGACACCACCAATTTTTGATTTGCATCTCGGTGTCGATTTCTTAAAGAGAATAAACCTAACTCAGGAGCCTCATCCCGTTATTCGAATCGAAGCTATTCATTTTTCCTCAACAGCGACAATCGATTTCTGTCTCGTAAACATCGACCATGGGGTTCCTTTCATTTCATTATTGGAACTTTCTCCTTTGGAAACTTCTGTTTATCAAACTTCATCCACTTTATTAACACTAGATCTTCTCACGCGAATTAACCTTGGTGTGTCTCCAGACAACAATTACTTCATCAGGTACATGGATGATGTATATGGGAGGTCTTGGCAAGTACGAACAGAATATAACGAGAATCCAAAGAAAACATCATCAGCTATTGATTTGGATAAACTTGTTGATCCTTATAAACTGCCTTCAGAAGTTTTGAGCACTGCAGTGGAGGCATTAAACTTATCCGACTCGTTAGAATATACAATGAATTATGACGCAGATTCTGAATATTATGTGTATCTTCATTTTTTTGACTTTAAGGACCGGGCAAATAAAATGAACCGGATATTGAATATTACTATTAATGGTTTTGATGATGATGTCACACAACCCCTTACTCTTTCATATTGGAAGCCCAATAGCGTTATTCTGCCTATAAAACAAGGGATGGGCATTTATAAGATATTGATTGAAGCAATCTCTTATTCTGATTTACCTGCCATGCTTAATGCTCTTGAGATTTATAGAGTAGTGCCTCAGTCAGATTCTGCCACTCAACAAGACGATGTTGATGCTATGTGGAACATCAAAGATTTTTATAAGATCTCTAGAATGAATTGGCAAGGAGACCCTTGTGAGCCGAAGAATTTTACATGGGAAGGTCTGACTTGCAGCAATGGGGACACTCCAAGAATCATTTCATTAAACTTGAGTTCAAGCAAATTGTCAGGGGAGATAGACATCTCATTCTCCAACCTCACATATTTAGAAATTTTAGATTTGTCAAACAACCAACTGATAGGAGAGGTGCCAGAATATTTTGCAGAACTACCAAGATTAAAAATTCTTAATTTGTCAAGGAATATGCTCTCAGGTTCCATTCCTATGAGTCTAAAGGCAAAGTCAAACGACACTTTGCAGTTGAGTTTGGATGGAAATATCGATATGTATCAGACAGGCTCATGGGAAAGCAACAATCAGAAGTTTATTGTTCCATTAGTTGTATCTGTAACAACATTTTTTGCAGTCCTTATAATATCTACCATGGTCATCCGGAGACTTAGGAAAAAAGAAAAAGTAATTTCTTCAAGTTCTGTCGAGGAGGAGCAATTAAAATCAACAAATCAAGTATTTTCTTACTCAGAGATTCTGAGAATCACTGATAATTTCGAAACAATGATCGGAAAAGGGGGATTTGGTAAGGTTTACCTAGGTACTTTAGAGGGTGGCATAAGAGTTGCTGTAAAGACACTTTCTTTGCCATCAACACAAGGGTATAAGGAGTTTCAGTCAGAGGCAAAATTGTTGATGCATGTTCATCATAGAAATGTAGTTTCTCTAGTGGGATACTGTGATGAAGGTGATGCTAAAGCACTTGTTTACGAGTATCTCCCAGAGGGGAATCTCCAACAAAAATTGTCAGATAAAAACACAAATGTTTTGGAATGGACTAAGAGACTTAAAATTGCCCTGGATGCAGCAAATGGAGTGGATTATTTGCATAATGGATGTAAGCCCCCTATAATTCACAGGGATTTGAAATTATCGAACATCTTATTAGATGAAAATATGCATGCCAAGATTTCAGACTTTGGAATGTCTAAAAGTTTTGCAAATGACAGTGACACTTATGTCACAACTTACCCAGCTGGCACACCAGGTTACGTTGATCCTGAATTTTATTGCACTGGGACTCTAAATAAGAAGAGTGATGTTTACAGTTTTGGGATAATTCTACTAGAGCTAATTACTGGTCAGCCAGCACTAAGAGGAACTCCTGACAATCTTAGTTACATACTTCCTTGGGTTAATCTTAAACTTAGAACCGGAGATATCCAAGAAATAGTTGATCCAAGGTTACGAGGAAAATACAACACAACTTCAGCATGGAAACTTTTGGGGACAGCCATGTCTTGCCTTGCCTAA 2505 0.3749 MPWILVLALCASSTIVILGETNERRDRKLANIDHSDLVSIDCGVNESYIDRTTNMQYQADEIQFGKIYNVSWNYNFEYVSQIEKQLNTLRSFPDGKRNCYTLELKQGKNKKYMMRAYLAYGNYDNKETPPIFDLHLGVDFLKRINLTQEPHPVIRIEAIHFSSTATIDFCLVNIDHGVPFISLLELSPLETSVYQTSSTLLTLDLLTRINLGVSPDNNYFIRYMDDVYGRSWQVRTEYNENPKKTSSAIDLDKLVDPYKLPSEVLSTAVEALNLSDSLEYTMNYDADSEYYVYLHFFDFKDRANKMNRILNITINGFDDDVTQPLTLSYWKPNSVILPIKQGMGIYKILIEAISYSDLPAMLNALEIYRVVPQSDSATQQDDVDAMWNIKDFYKISRMNWQGDPCEPKNFTWEGLTCSNGDTPRIISLNLSSSKLSGEIDISFSNLTYLEILDLSNNQLIGEVPEYFAELPRLKILNLSRNMLSGSIPMSLKAKSNDTLQLSLDGNIDMYQTGSWESNNQKFIVPLVVSVTTFFAVLIISTMVIRRLRKKEKVISSSSVEEEQLKSTNQVFSYSEILRITDNFETMIGKGGFGKVYLGTLEGGIRVAVKTLSLPSTQGYKEFQSEAKLLMHVHHRNVVSLVGYCDEGDAKALVYEYLPEGNLQQKLSDKNTNVLEWTKRLKIALDAANGVDYLHNGCKPPIIHRDLKLSNILLDENMHAKISDFGMSKSFANDSDTYVTTYPAGTPGYVDPEFYCTGTLNKKSDVYSFGIILLELITGQPALRGTPDNLSYILPWVNLKLRTGDIQEIVDPRLRGKYNTTSAWKLLGTAMSCLA* 835
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g0856 834 Pfam Malectin-like domain 40 370 IPR024788 -
Apr9g0856 834 Gene3D Transferase(Phosphotransferase) domain 1 657 834 - -
Apr9g0856 834 Gene3D Phosphorylase Kinase; domain 1 563 656 - -
Apr9g0856 834 SUPERFAMILY L domain-like 407 492 - -
Apr9g0856 834 Gene3D Ribonuclease Inhibitor 383 505 IPR032675 -
Apr9g0856 834 Pfam Protein tyrosine and serine/threonine kinase 583 783 IPR001245 GO:0004672|GO:0006468
Apr9g0856 834 ProSitePatterns Protein kinases ATP-binding region signature. 587 609 IPR017441 GO:0005524
Apr9g0856 834 Pfam Leucine rich repeat 427 483 IPR001611 GO:0005515
Apr9g0856 834 ProSiteProfiles Protein kinase domain profile. 581 834 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr9g0856 834 ProSitePatterns Serine/Threonine protein kinases active-site signature. 701 713 IPR008271 GO:0004672|GO:0006468
Apr9g0856 834 PANTHER OS07G0107800 PROTEIN-RELATED 34 833 - -
Apr9g0856 834 PANTHER RECEPTOR-LIKE KINASE PLANT-LIKE PROTEIN, PUTATIVE-RELATED 34 833 - -
Apr9g0856 834 SUPERFAMILY Protein kinase-like (PK-like) 563 826 IPR011009 -
Apr9g0856 834 CDD STKc_IRAK 587 834 - -
Apr9g0856 834 SMART serkin_6 581 824 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr9g0856 834 Gene3D - 202 325 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g0856 Apr-Chr9 16459251 16469316 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr9g0856 33 833 Receptor kinase-like Gene Family AT1G51880 40.723 0.0 578
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Apr9g0856 Malectin_like 3.8e-73 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g0856 - - vun:114194066 981.089