Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g0852 ATGGAGGACCAAAATGCTGGTGATAGGTTTAGCAAGGTGCTCCGCAAGGTTAAGCCTTACCTTGCTATGGTGTCCCTTCAATTTGGCTACGCCGGAATGTACATCATCACCATGGTTTCATTTAAGCATGGCATGAGCCATTGGGTGCTATCGGTGTACCGTCATATAGTTGCCACTCTTATCATGGCTCCTTTTGCGTTTTTCCTTGAAAGAAAAATAAGACCAAAGATGACTCTGCCCGTCTTCCTGAGGCTAGCGGTTCTCGGTTTCCTTGAACCAGTGCTTGATCAAAACCTGTACAACATGGGGATGAAGAACACCTCAACAACGTTTGCATCGGCCACCGTTAATGTCCTCCCAGCCATTACTTTTATAATGGCCCTCATTTTCAGGTTAGAGACAGTGAACTTGAGGAAAATACACAGCATAGCCAAGGTAATTGGAACCGCAGTAACAGTTTCAGGAGCCATGGTTATGACTTTGTACAAAGGTCCTGAGCTTCAAATCATAAAGGGACAAGCAAGCCATCATGAAAGTGCCAGTGGCACAGAGCCCTCTGAACAACACTGGGTGCTTGGCACAGTAATGCTCATAGCAAGTTGTGGTGGTTGGGCTAGCTTCTTTATCCTGCAATCTTTCACTTTGAAGATGTACCCAGCAGAGCTCTCCGTCACATCTTGGATTTGCTTTTTGGGCATTTTTGAGGGTGCAATTGCGTCCCTTATTTTTGAACGTGACATGAGTGTTTGGTCCATAGGCTGGGACTCGAGGCTTCTTGCTTGTGTTTATTCTGGAGTGGTGTGCTCTGGAATGGCATACTATGTACAAGGAGTTGTGACCAGGGAACGTGGACCCGTGTTTGTGACTTCTTTTAGCCCTCTATGTATGATAATCACTGCTGCGTTGGGTTCTATTGTCTTGGCTGAGCAAGTTCATTTGGGAAGTATAATTGGTGCTATCATCATTGTGAGTGGACTTTATACTGTGGTATGGGGGAAAAGCAAAGACAGTTTGAACTCAACGGATGCAGGGAAAAGTGAGGGCCAAGAGTTGCCAATAAAGGACGGAACAAGAGCAGGATCAGACATTTTTGACACTATTGAGGTCAATGTTGCTGCTGAGATGAAGGGTGCAGGAAAAAATGTCCTTCCATCAGCAAGAACATAG 1167 0.455 MEDQNAGDRFSKVLRKVKPYLAMVSLQFGYAGMYIITMVSFKHGMSHWVLSVYRHIVATLIMAPFAFFLERKIRPKMTLPVFLRLAVLGFLEPVLDQNLYNMGMKNTSTTFASATVNVLPAITFIMALIFRLETVNLRKIHSIAKVIGTAVTVSGAMVMTLYKGPELQIIKGQASHHESASGTEPSEQHWVLGTVMLIASCGGWASFFILQSFTLKMYPAELSVTSWICFLGIFEGAIASLIFERDMSVWSIGWDSRLLACVYSGVVCSGMAYYVQGVVTRERGPVFVTSFSPLCMIITAALGSIVLAEQVHLGSIIGAIIIVSGLYTVVWGKSKDSLNSTDAGKSEGQELPIKDGTRAGSDIFDTIEVNVAAEMKGAGKNVLPSART* 389
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g0852 388 PANTHER WAT1-RELATED PROTEIN 13 361 IPR030184 GO:0016021|GO:0022857
Apr9g0852 388 PANTHER WAT1-RELATED PROTEIN 13 361 - -
Apr9g0852 388 SUPERFAMILY Multidrug resistance efflux transporter EmrE 249 334 - -
Apr9g0852 388 Pfam EamA-like transporter family 31 151 IPR000620 GO:0016020|GO:0016021
Apr9g0852 388 Pfam EamA-like transporter family 193 330 IPR000620 GO:0016020|GO:0016021
Apr9g0852 388 SUPERFAMILY Multidrug resistance efflux transporter EmrE 53 161 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g0852 Apr-Chr9 16319120 16322994 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr9g0852 14 355 Nodulin-like Gene Family AT1G44800 64.431 1.50e-168 474
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g0852 - - gmx:100814921 669.077
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr9g0852 9 16319120 16322994 Apr9g0852 9 16319120 16322994 ECH