Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g0848 ATGAAGGAACCCTGTGATCTTGGCACGCCGAAGCGCCGAGAAGCAGGGGTCAACAGAAAGAGAAAGTCCACCGAAATACTCACTCCATGCAAAAGAGCTTCTAAGGAAAATTCAAGCATGTGTGCAGGACAGAAAATACATCCATTTTTTTCATTATGGAAGCGCGGAAAAAATGATTCAAAACATGATTTATCCATGGCTCAGAGAAACGGCGGAAAATTTCTCTATGTTCCAATTCATGTATTTGAAAATGTTCAGGATGATCCTACACCTCTCGATTGGAGTGACTGGACATTTTTGGGGAAGACCGCCCAAGTGGATTTTGGTCCAGAAAGTTCAAATTTGTCTGCTTTTGAGGATTCTATTGAATCCCTAAATTTCGATCATTTTCTTAGTGCTTCAAAATCCTCATCTTCAATTTTTCCAAATGCCTTCTCTTGCTCAGATCAACTTTCTGTACAACCAGATAATATGCTGAAAATATCACTAGCAAACTCAAATGTGCTAGCTAATCAGCAAACAATATGTCCTTCAAAGCCAGAAGATTCCAAAGTGGAGGACTTGGAGGTGAATGAAGTCAGTACTTTTTCAGGGCATAGGGGCATTTTCAGGAAGTCAGATACTGAGCCATCGAGTAAATTTCTTCAAGAAAGTATGAAATCTTATTACCATAGTCGTGAAGATAAGGCTGAGAGCAGCTTATGGATACACAAGTACAAGCCAACAAAGGCCTTTGAGGTGTGTGGTAATGATGAAGCTCTGAATATCTTGGGTGAATGGTTACATCTTTGGCATGAAAAGCGTTATCAATGCAGAAGGGAATCCTCTGACAGGGATATGAGTGATATGAAAGATGATGAAGATGATTATAACTGCTCTGATGGTGACTATGCTCCGAAATATATTGACGATAAGGATTCCCTACAGAACGTTCTTTTGCTTACGGGACCTGTTGGGAGTGGCAAGTCTGCAGCTGTGTATGCATGTGCCCGAGAGCAAGGGTTTGAAGTTTTAGAGCTCAATACATCAGACCGTCGAAATGGGGCTACTGTCAAGCAGAATTTTGGAGATGCTCTTGAATCACATGGGTTCAGGTTAATGGATCAGGATCACACTGCTAGTTCACATAAAAAAATTACAAAATTGCCCTCAGCTCCAGCTTTGCCTAATGGTAAAGCAGCTAAGGAGATGAATGATGATGGGGTGATTGAACTGATTACCATATCCAATGATGAAACCCATAGTCCTGCTGGAACTTCTCCGAGGTTACATGACCAAAAAATTGTATATATAGGAGATAATAGTATCCAAACTTTAATTCTAGTTGAGGATGTGGACATCCTTTTTCCTGAAGATCGTGGTTGTATTGCTGCCATACAACACATTGCTAAGGCAGCACAAGGGCCAATTATATTGACCAGCAATAGTAAGAAGCCTGGACTGCCAGATAAGTTTGCTAGACTACATGTTTCTTTCACATTGCCTTCACCAGATGAGTTATTATGCCATTTGTACATGGTTTGTGTCACAGAAGAAGTCAACATTGATCCTCTTTTACTGGAGAAATTTATAGAGTCTTGTGATGGAGATATTCGTAAAACCATCATGCAACTTCAGTTCTGGTTCCAGAGTAAAAAATATAGAAAAGACAGGAAAGTGCAGATGGTGTATGGCTCACTTCCCTTTGATCTTGAGGCTTGTCATCAAATTACACCAAAGATCCTACCCTGGAATTATCCCTCAGAACTATCCAAACTAATTGAGAAGGAAGTTGCCAAGTCAATAACCATAATGGAAGAAAACTCATGCTTGCAGGGTTTAGTTAATAAAGAGCTTGACATAAATGAAAGGCAAAATGATTTTGATGTGAAATGTATGAGGACTGATTATTTAGAGGCCAAGGCAGAGAGGATAAAGAGGAATACATCTCTTACAGACTGCAGTGAGTTTGAAAGTGAATATAATGCTATTTCTGAGCTTTCTAATTGTTCTAGATCCCCAGTAACATCCTCTTTGAAAAAGGGTCAAAAGGAACTTATGCTGAGGTCCTCTGATTCTGGTGAAAAGGATCCAAATAATGGACTTTGTCCAGACGTTCATGATGAATCTTACAAGAAGAGACATTCCGTTGAAAGCAACAGTGAATCTCCCTGTAAGCTACAATTGAATCAAAGCTACATAAGTACATCATTTTGCAAACTCGTTGGTTCTGGTTTGGATGGTTCAGAGGAGCAATGCAAATATTTAGAAACTGTGCATGATGTCTGCTTAAATGAATCACAGAAATCGTTGGACCTATCCTGCTTTACAGGATCAATATTCCCTCCTGAGACTGCAAATCAAAATGGAATAAAGACAATGTCGGGATCAGTGTCTTCTGGTCATCTTGCGTATCCGGTAGAAGTTTCTTTGAACAATGAGCTGACACCATTCACTCACAGTGATTGTCATTGCTTAGCCAAATTGCCACAAAATTCTGATTCATTGGTGAATGCTGAATTTCCAGAATCTTCTCCAAAAGCAGCTGTACAAGATTTCAGAGATGAGAGCACACAAACCAAAACTGTGTATAATGGGATGGATGAGTGCAGTCATGTTGATATGACATTGAAGTCAAAGTTTGTTGAGTCTAGTCCTTCTATGGAGACAGATATGGTACAAAATTTATGGAGGAAACTTCGAGTTTGTCGAACAAATTTTAGACAGCATGCCAACTTAGAAAAGTTGGGTGTTATTCAAGTTGTTAAACTTACTAGTGGGCTGACCAATCTAATTTCAGAAGCTGATTTGCTGTTTAGTAATCACCAACAAAAACAATGTGGTATTTTGGAGCCTCCATTGTCCCTTTCTGATGAAGCCACATTTAACTGGTATGATGAGCAAATGATGATGTCTACTGTTGCTGCACATGGTTTTTGTTTTTATGCCAAACATATATCAGATGTGGGATCTAGGTTGGGTTTTAATAACAAGGTAGATCTAACTTCAGAGATGTTGGATTGCACTACTAATGTTATGGCACTGGGAAAATTATCTAGACAGGACGACACAAAATACACGAGTATCTACACTAAAAAGCAATTAGAGGTCAACAACCCAGCAAATGATAAGAGAACATCATTGGTCAACGTAATTGGGTCTATTGTTCCTGCAAGATCGTCATTGACACTAAAAGGTCTTGCACTCAATGAATATGTGTCTTCACTACGCCAAATTTCAATTTCAGAAGGTTTCCGCATTTCACAAGGCGTTGCAAAGACAAGAAAACTAAGGATGCGGGGTTCTCAACATTATTTGAGCAGATGTAGGATGAAGTTGTCTCCTGAAGATATATCATTGGTGTGTGAGGGCGATTTGTACAGAAAGATTTCATCACAATATCCTGCTAACATGGAAAGCAATTGTACATGA 3411 0.3931 MKEPCDLGTPKRREAGVNRKRKSTEILTPCKRASKENSSMCAGQKIHPFFSLWKRGKNDSKHDLSMAQRNGGKFLYVPIHVFENVQDDPTPLDWSDWTFLGKTAQVDFGPESSNLSAFEDSIESLNFDHFLSASKSSSSIFPNAFSCSDQLSVQPDNMLKISLANSNVLANQQTICPSKPEDSKVEDLEVNEVSTFSGHRGIFRKSDTEPSSKFLQESMKSYYHSREDKAESSLWIHKYKPTKAFEVCGNDEALNILGEWLHLWHEKRYQCRRESSDRDMSDMKDDEDDYNCSDGDYAPKYIDDKDSLQNVLLLTGPVGSGKSAAVYACAREQGFEVLELNTSDRRNGATVKQNFGDALESHGFRLMDQDHTASSHKKITKLPSAPALPNGKAAKEMNDDGVIELITISNDETHSPAGTSPRLHDQKIVYIGDNSIQTLILVEDVDILFPEDRGCIAAIQHIAKAAQGPIILTSNSKKPGLPDKFARLHVSFTLPSPDELLCHLYMVCVTEEVNIDPLLLEKFIESCDGDIRKTIMQLQFWFQSKKYRKDRKVQMVYGSLPFDLEACHQITPKILPWNYPSELSKLIEKEVAKSITIMEENSCLQGLVNKELDINERQNDFDVKCMRTDYLEAKAERIKRNTSLTDCSEFESEYNAISELSNCSRSPVTSSLKKGQKELMLRSSDSGEKDPNNGLCPDVHDESYKKRHSVESNSESPCKLQLNQSYISTSFCKLVGSGLDGSEEQCKYLETVHDVCLNESQKSLDLSCFTGSIFPPETANQNGIKTMSGSVSSGHLAYPVEVSLNNELTPFTHSDCHCLAKLPQNSDSLVNAEFPESSPKAAVQDFRDESTQTKTVYNGMDECSHVDMTLKSKFVESSPSMETDMVQNLWRKLRVCRTNFRQHANLEKLGVIQVVKLTSGLTNLISEADLLFSNHQQKQCGILEPPLSLSDEATFNWYDEQMMMSTVAAHGFCFYAKHISDVGSRLGFNNKVDLTSEMLDCTTNVMALGKLSRQDDTKYTSIYTKKQLEVNNPANDKRTSLVNVIGSIVPARSSLTLKGLALNEYVSSLRQISISEGFRISQGVAKTRKLRMRGSQHYLSRCRMKLSPEDISLVCEGDLYRKISSQYPANMESNCT* 1137
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g0848 1136 MobiDBLite consensus disorder prediction 664 710 - -
Apr9g0848 1136 Gene3D - 495 558 - -
Apr9g0848 1136 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 233 549 IPR027417 -
Apr9g0848 1136 CDD AAA 312 371 - -
Apr9g0848 1136 PANTHER CHECKPOINT PROTEIN RAD17/RAD24-RELATED 2 1132 - -
Apr9g0848 1136 Gene3D - 232 492 IPR027417 -
Apr9g0848 1136 MobiDBLite consensus disorder prediction 1 23 - -
Apr9g0848 1136 MobiDBLite consensus disorder prediction 694 710 - -
Apr9g0848 1136 PANTHER CELL CYCLE CHECKPOINT PROTEIN RAD17 2 1132 IPR004582 GO:0006281
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g0848 Apr-Chr9 16222916 16236493 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr9g0848 231 540 Core DNA Replication Machinery Family AT5G22010 21.118 9.73e-09 57.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g0848 - - gmx:100815984 1443.71
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr9g0848 9 16222916 16236493 Apr9g0848 9 16222916 16236493 ECH