Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g0847 ATGTGTGACAGATGGAAGCCAGGTGTTGACTTAGAGTTTGAAAGTGTCGATGAAGCATGGGAGTTTTGGAGTGAATATGGTAGGAGGAAGGGTTTTGGCATTAGAAAGCAATACTTCAATAAGCGAAAAAATGGTGCTATCACAAGTTATAAATATGTTTGTTGTAAAGAAGGACTTTGGAAAGGAGATAAAAGAGATTCACAAGTTGTAAAACATAGAGCTGAGACTAGGACGAATTGTTATGCTCGAATTGGAGTGTCCTTGGGAAAGAACAAAAATTTTGTTATACATGAGTTTGTAGAAGAACATAATCACCCTTTACAAGTTTTAGAGATAACCCACATGTCAGTTTCACATCGTAAGATAACCCTGGTCCAAGCATTTGAGATTGGCATTACTGAGAGTTTCGATCTACAACAAAAGTCATCATATCAACTTGCTACAACACTTGTAGGCAATAAGGTGAATGTGGGTTACACTAGGTTGGATGCCAAAAATTACCTAAATGTAAGAAGACAATGA 522 0.3697 MCDRWKPGVDLEFESVDEAWEFWSEYGRRKGFGIRKQYFNKRKNGAITSYKYVCCKEGLWKGDKRDSQVVKHRAETRTNCYARIGVSLGKNKNFVIHEFVEEHNHPLQVLEITHMSVSHRKITLVQAFEIGITESFDLQQKSSYQLATTLVGNKVNVGYTRLDAKNYLNVRRQ* 174
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g0847 173 Pfam FAR1 DNA-binding domain 21 108 IPR004330 -
Apr9g0847 173 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 5 145 - -
Apr9g0847 173 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN 5 145 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g0847 Apr-Chr9 16214805 16215326 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Apr9g0847 FAR1 1.2e-19 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g0847 - - aprc:113874315 362.459