Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g0829 ATGGAAAGCAACTTATCAACAAGCAATAACACACAGGCTTGCGCGGCATGTAGATTTCAACGCAGAAGGTGTGGCTCAAACTGCGTTCTCGCACCTTATTTTCCTCACGATCGTCAAAACCAATTTCTCAACGCACACAGATTATTTGGTGTTGGTAGAATCACCAATATGTTGAAGACTCTTGATCCTCAAAACAGAGATATAGCTGCGAGTACCATTATTTACCAATCTGACATGCGCGCCATAGATCCTGTTGGCGGTTGTTACAGCCTAATTCATCACTTGCAGTCACAGATTGAGTCCACCGAAGCCGAACTTCACCTTGTTCTTCAACATCTTGCTTCTTTCAAGGCTCAGGCTAGCTCTGGTAACATCATCAATGGCACCCCTCAATCTTATCTTGAATCAATGCCACTAGAACTACAACAACAACAACAACAATACGTCAGTTATAATCCTTCACAAGAAGACATCAACACGTGGGCTTTACAGAACTCCATTCCTTTGTCCCATTTGTCTATAGAGGATAACCAAGAACCTGTTGTCGATTCTGGGTACGATGATCAAAAGCCTGTTCTTGACTTCATGAACAAAATAAATTCGGATGTTTGA 612 0.4216 MESNLSTSNNTQACAACRFQRRRCGSNCVLAPYFPHDRQNQFLNAHRLFGVGRITNMLKTLDPQNRDIAASTIIYQSDMRAIDPVGGCYSLIHHLQSQIESTEAELHLVLQHLASFKAQASSGNIINGTPQSYLESMPLELQQQQQQYVSYNPSQEDINTWALQNSIPLSHLSIEDNQEPVVDSGYDDQKPVLDFMNKINSDV* 204
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g0829 203 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 8 201 - -
Apr9g0829 203 ProSiteProfiles LOB domain profile. 12 113 IPR004883 -
Apr9g0829 203 PANTHER LOB DOMAIN PROTEIN 8 201 - -
Apr9g0829 203 Pfam Lateral organ boundaries (LOB) domain 13 109 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g0829 Apr-Chr9 15909813 15910424 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr9g0829 12 185 AS2 family AT3G13850 45.977 5.07e-46 151
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Apr9g0829 LOB 1.9e-35 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g0829 - - ccaj:114916407 249.21