Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g0827 ATGGCCGATTCCAGAGTGGAAACAATTGCCAGATTAGCCCAATGGAAAATCGACAACTTCGGACCCTGTTCCTACAAAAAATCCGACCCTTTCAGGCTCGGAATTTGGAACTGGTACTTGTCCATCGAGCGGAATAGGTATCTCTATATTCACCTCTTTCCAGAACCTTCAAGAGTTTCTAAGGAGCAGCCACCTGTTGCACGTTTCATTCTACGTGTCTCTAACACTGGCTCTACCCGCAGATTTTACATTTCCCCTGTTCATGAGAGGGTGCTTAGGACATGTGATGATTTTGTCTGGCCTGTGGATACTACACTAATTGGGCGTATTGTTATCGATGTTGAATTTCTTGACCTGAAGATCTGCCCTCTGAATGGTGGAGAAGCTAGATCTATATGGCCATCTGATGGAAAACTGCAATCTGTTGCAGCTCAAAGCACTCTTCGATGCCTCTCTCGCATGCTTGATGATGCTATACATGCTGACCTCGCCATTATCACTACGGATGGGACCCTGAGAGCTCATAAAGCAGTTTTGTCTGCAAGTTCTCCTGTGTTCCAGGGCTTGTGTGATCATGATGGAGATGAGAAAGAGACATCTATGGTCCACATGGAAGATATGTCACAAGAATCGTGCATGTCCCTTCTGAGTTACTTGTACGGCACTATAAAACAAGAAGATTTCTGGAACCACAGGCTTGCGTTGCTTGGAGCAGCCAATAAATATGAGATTGGTGATCTGAAAGATGCCTGTGAAGAAAGCCTACTGGAAGATCTTAACTCAGGAAATGTTCTGGAGAGGCTAAACGAGGCTTGGCTTTACCAGTTGCACAAGTTAAAGAAAGGATGTTTCACATTCTTATTTGATTTTGGTAAGATACATGATGTTAGAGATGAAATAAATACCTTTTTCCGTCATGCTGACAGGGAGCTAATGCGGGAGATGTTTCAGGAAGTGCTTACAATTTGGAAATAG 975 0.4379 MADSRVETIARLAQWKIDNFGPCSYKKSDPFRLGIWNWYLSIERNRYLYIHLFPEPSRVSKEQPPVARFILRVSNTGSTRRFYISPVHERVLRTCDDFVWPVDTTLIGRIVIDVEFLDLKICPLNGGEARSIWPSDGKLQSVAAQSTLRCLSRMLDDAIHADLAIITTDGTLRAHKAVLSASSPVFQGLCDHDGDEKETSMVHMEDMSQESCMSLLSYLYGTIKQEDFWNHRLALLGAANKYEIGDLKDACEESLLEDLNSGNVLERLNEAWLYQLHKLKKGCFTFLFDFGKIHDVRDEINTFFRHADRELMREMFQEVLTIWK* 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g0827 324 PANTHER OS08G0103600 PROTEIN 1 324 - -
Apr9g0827 324 Pfam BTB/POZ domain 155 257 IPR000210 GO:0005515
Apr9g0827 324 Gene3D Potassium Channel Kv1.1; Chain A 135 288 IPR011333 -
Apr9g0827 324 PANTHER OS08G0495500 PROTEIN-RELATED 1 324 IPR044714 -
Apr9g0827 324 ProSiteProfiles BTB domain profile. 161 220 IPR000210 GO:0005515
Apr9g0827 324 SUPERFAMILY POZ domain 143 257 IPR011333 -
Apr9g0827 324 SMART BTB_4 161 259 IPR000210 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g0827 Apr-Chr9 15889018 15893984 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Apr9g0827 BTB 2.7e-18 CL0033
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g0827 K10523 - gmx:100775687 569.696
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr9g0827 9 15889018 15893984 Apr9g0827 9 15889018 15893984 ECH