Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g0822 ATGCAAATGCAAACGCAACTAAACCTATTGTTCGGGCTTGCATTAGTAAATATAGGAGCAAGTGCAGCTAATATAGGCCTACCTGGTTGCCTAGACACATGTGGAAACGTTTCAATTCCATATCCATTCGGTGTAGGCAATTCTGAAACAGGTGAGAACTGTTTTTTGGAAGAGAAATTGAATCTGAAGTGTGAAAATGACACTTTACTTATAGGTAACATGCAAGTTATAGACATAACCCTTGAAGGGCATTTGGACATGTTCTTTTATGTCTCCCAACTTTGTTCTGACAAATCAAATGGAGATGCCAATGAGCCCTATCTTAGCACTCCTGGTTTCACAATTTCTAGTGAAGAAAACAAGTTCATAAGTGTCGGTTGTGAGAGTTATGGCTTTCTCAATAGCTTTTACAATGGTATAGGATATTCAACAGGGTGCTCAACAGGATGTACCAAGTTCCCAGCTGCTAATATTGTACCTTATGGACACTGTTCGGGGATAGGGTGTTGCCAAGTGGATATACCTCCGAACATGATGAATATAACTATAAAAGCACATAGATTTCGCACTCCAAGTGTCCGAAGCTGTAGCCATTCTTTTATTGCCAAACATGACTCCTATAAATTTAATGTTAGTCACTTAGAGAATATGCCCTTCACTATGCTCCCTATAGTTGTTGATTGGACTGTTGGAAACGAAGGATGTGAAGCTTTTCAGAATGGATCACTCAAGAGTGCATGCATGAACAATAGTTATTGTGATGACTTTGACATTAGTTATGGATACCGGTGCACATGCAATCCAGGCTATGATGGAAACCCTTACCATCCAAATGGTTGCCAAGACATTGATGAATGTAAGACAAAAAGTCATACGTGCATAAGTGAAAACTATTGTCGCAACACTGATGGACATTATGAATGTTTTTGTCCTCCTGGACAAGTTGGAAAGGGAAACATCGAAGAAGGATGCAAGCCCATCCAACAGGAAAGCCCTGTAAATAAGTATGCTGTAGGTGCGTGTATAGCATTTATAGCTCTGCTGATTATTTCCTGGTTATACCTAATATATCATAAAAGGAAACTTATTAATCAAAGAAACAAATTCTTTCTGCAAAATGGGGGTTTCATTTTGCAACAACGACTCTCTACAAAACAAGACTCCTCCCAAATTGCACAAATTTTCACAGCAGAAGAACTAAAGAAGGCCACCAACAACTATGATGAAAAATTGATCATAGGCAACGGAGGTTACGGTACAGTTTTCAAAGGAATCCTTGCAAATAACAAGGTTGTGGCTATCAAAAAGTCCAAAGTAGTGGATCAGAGCCAAGTTGAGCAATTCATCAATGAAGTAGTTATCTTGTCCCAAATCAATCACAGGAATGTGGTAAAGCTCTTGGGATGTTGTTTAGATACTGAAGTCCCATTATTGGTCTATGAATTTGTTAACAATGGTACCCTTTTTCATCATTTGCACAATGGAAATAAGACAAGTAATGTACCTTGGAAGACCCGTTTAAGAATAGCCATAGAAGCAGCAAGAGCACTATCATATTTGCACTCAGATGCCTCCACAACTATTATCCACAGAGATGTCAAGAGTGCCAACATTCTTTTGGATGATAATTACACTGCCAAAGTGTCTGATTTTGGAGCTTCAAGATTGGTTCCAGTTGATCAAGCAGAATTAGCCACATTGGTGCAAGGTACTTTTGGTTACTTAGACCCAGAGTACATGCAAACAAGTCGATTAACCGAAAAGAGTGATGTCTATAGCTTTGGTGTAGTACTTGTAGAGCTACTAACAGGGCAGAAAGCACTCTCATTTCAAAGGTCAGAGGAGGAAAGAAGCATTGCTATGCTTTTTCTCTCTAGCTTGGAAAACGATAATTTCTTTAAAATTCTAGAATCTGGTCTTCTAACTGAAGAAAACAAAGACGAGATCAGGAAAGTTGCTGTTCTTGCAAGCAAGTGCTTGAGTCTTAAAGGGGAAGAGAGGCCTAGCATGAAGGAAGTGTCAATGGAGCTTGAGGGGATAATCGTAATAGAGAAGTACCCATGGAACAATAAAAATCTAGACCTCCAGGAGTCACAATACTTGCACAGCAATAGCAATAGCTACGGAAGTTCTTGGTATGACAGCATGAAGGACTATGTACGAATTGTCCTAGATGTTGCACGCTGA 2187 0.3937 MQMQTQLNLLFGLALVNIGASAANIGLPGCLDTCGNVSIPYPFGVGNSETGENCFLEEKLNLKCENDTLLIGNMQVIDITLEGHLDMFFYVSQLCSDKSNGDANEPYLSTPGFTISSEENKFISVGCESYGFLNSFYNGIGYSTGCSTGCTKFPAANIVPYGHCSGIGCCQVDIPPNMMNITIKAHRFRTPSVRSCSHSFIAKHDSYKFNVSHLENMPFTMLPIVVDWTVGNEGCEAFQNGSLKSACMNNSYCDDFDISYGYRCTCNPGYDGNPYHPNGCQDIDECKTKSHTCISENYCRNTDGHYECFCPPGQVGKGNIEEGCKPIQQESPVNKYAVGACIAFIALLIISWLYLIYHKRKLINQRNKFFLQNGGFILQQRLSTKQDSSQIAQIFTAEELKKATNNYDEKLIIGNGGYGTVFKGILANNKVVAIKKSKVVDQSQVEQFINEVVILSQINHRNVVKLLGCCLDTEVPLLVYEFVNNGTLFHHLHNGNKTSNVPWKTRLRIAIEAARALSYLHSDASTTIIHRDVKSANILLDDNYTAKVSDFGASRLVPVDQAELATLVQGTFGYLDPEYMQTSRLTEKSDVYSFGVVLVELLTGQKALSFQRSEEERSIAMLFLSSLENDNFFKILESGLLTEENKDEIRKVAVLASKCLSLKGEERPSMKEVSMELEGIIVIEKYPWNNKNLDLQESQYLHSNSNSYGSSWYDSMKDYVRIVLDVAR* 729
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g0822 728 ProSiteProfiles EGF-like domain profile. 282 320 IPR000742 -
Apr9g0822 728 Gene3D Transferase(Phosphotransferase) domain 1 483 703 - -
Apr9g0822 728 Pfam Wall-associated receptor kinase galacturonan-binding 30 83 IPR025287 GO:0030247
Apr9g0822 728 SMART egfca_6 282 325 IPR001881 GO:0005509
Apr9g0822 728 SUPERFAMILY Protein kinase-like (PK-like) 388 677 IPR011009 -
Apr9g0822 728 PANTHER WALL-ASSOCIATED RECEPTOR KINASE 2-LIKE ISOFORM X2 20 706 - -
Apr9g0822 728 SUPERFAMILY EGF/Laminin 280 316 - -
Apr9g0822 728 ProSitePatterns Serine/Threonine protein kinases active-site signature. 528 540 IPR008271 GO:0004672|GO:0006468
Apr9g0822 728 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 20 706 IPR045274 GO:0007166
Apr9g0822 728 ProSiteProfiles Protein kinase domain profile. 407 689 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr9g0822 728 ProSitePatterns Calcium-binding EGF-like domain signature. 282 308 IPR018097 GO:0005509
Apr9g0822 728 Pfam Calcium-binding EGF domain 282 315 IPR001881 GO:0005509
Apr9g0822 728 Pfam Protein kinase domain 408 673 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr9g0822 728 ProSitePatterns Aspartic acid and asparagine hydroxylation site. 299 310 IPR000152 -
Apr9g0822 728 SMART serkin_6 407 681 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr9g0822 728 SMART egf_5 285 325 IPR000742 -
Apr9g0822 728 SMART egf_5 234 281 IPR000742 -
Apr9g0822 728 CDD STKc_IRAK 413 680 - -
Apr9g0822 728 Gene3D Laminin 233 324 - -
Apr9g0822 728 Gene3D Phosphorylase Kinase; domain 1 375 482 - -
Apr9g0822 728 ProSitePatterns Protein kinases ATP-binding region signature. 413 436 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g0822 Apr-Chr9 15847549 15853630 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr9g0822 30 728 Receptor kinase-like Gene Family AT1G21230 43.862 0.0 554
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK Apr9g0822 Pkinase 7.5e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g0822 - - gmx:100819535 863.218