Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g0821 ATGATGCTCATGCTGCTAACCATATTGTTAATGCTTGCATTAGTAGGGGTAGGAGTTGCTGTAGTAGATACATCTCTCCCTGGTTGCATAGACACTTGTGGAAATGTTACAATTCCATATCCATTTGGTGTAGGTAAATCTAAAACCGGTGAGAACTGTTTCTTGGAGGATGGGTTGAATCTTACTTGCCAAAATAATTCTCTATTTCAGGGAAATACGCAAGTTTTAAACATATCCCTCCAAGGTCAATTTGATATGATGTTTTTTGTCTCCGAACTTTGCAAAGATACCAAAAATGGTGTAGCTAATCAACCCTATCTTAGCACTCCAGCTTTTACCATTTCTAGCAAAGAAAACAAGTTCATAAGTGTCGGTTGTGACACTATTGGCTCTCTCAATAGCTACCGCAATGGTGTAGAATATTCAACTGGGTGCTTAACAAAGTGTGGTAGGTTCCCTTACGATGTGGTAAACAATGGAACATGTTCGGGGATAGGGTGTTGCCAAGTGGATATTCCTCTTGGCATGAATAATATCACTTTACAAACAAATAGTTTTAACTCTTTGAACATCACTGATTGTAGTTATTCCTTTATTGCCAAACAAGGCTTCTATGAGTTTAGCATCGATCATTTAGAGAAACTGCCTTTTAATGTGCTTCCTATTGTTATTGATTGGACTGTTGGAAATGAGAGATGTGAAGCTTTCCGGAATGGATCACTCAAAAGTGCATGCATGAATAATAGTTATTGTGATGATGTTGGAACTACTTATGGATATAGATGCATATGCAGAACAGGTTATGACGGAAATCCATATCATCCAAATGGTTGCCAAGACATTAACGAATGTAAGATAAACAATCATACGTGTATAAGTGAAGATCATTGCCGTAACACTGATGGGTCTTTCGAGTGCTTTTGTCCTGATGGACAAGTTGGAAATGGAAAAAGCGATGGAGGATGTCGGCCAATACAAGGGAAAAGTAATCAAACCAAGTATGCCGTTGGAGCAAGTGCAGGTTTTCTGGCACTGTTACTGATTTCTTGGATATACATAATATATCAAAAAAGGAATCTCATTAAACAAAGAGAAAAATTCTTTCGACAAAATGGTGGTTTCATTTTGCAACGACGACTGTCAACAATGACAACAAATCAAGACCCTTCCCAAACTGCACAAATTTTCACAGCAGAAGAGCTAAAGAAAGCCACTAACAATTATGATGAGGGCCTAATCATTGGCCAAGGAGGTTTTGGCACAGTTTTCAAAGGAATCCTTGCAAATAACAACGTTGTTGCGATTAAGAAATCTAAAGTTGTGGATCAAAGCCAAGTTGAGCAATTCATTAATGAGGTGATTATTCTGTCCCAAATCAACCACAGGAATGTCGTAAAACTCTTGGGTTGTTGTTTAGACATTGAAGTCCCATTATTGGTCTATGAGTTTGTTAATAATGGTAACCTTTATGATAATTTACAAAATGAAAACAAGGCAGGTAATATGCCTTGGGAGACTCGTCTAAGAATAGCCATAGAGGTAGCAGGTGCTCTATCATATTTGCATTCAGATGCTTCCACAACTATTATTCATAGAGATGTCAAGAGCGCTAACATTCTCTTGGATGACACTTACACTTCAAAAGTGTCGGATTTTGGAGCTTCAAAATTGGTTCCCCTTGATCAAGCAGAATTAGCCACAATGGTACAAGGAACTTTTGGTTACTTGGACCCAGAGTACATGCAAACAAGTAATTTAACTGAGAAGAGTGATGTCTATAGCTTTGGAGTAGTGCTTGTGGAGCTACTAACAGGACAAAAAGCTCATTCATTTCAAAGGCCAGAGGAGCAACAAAGTCTAGCTATACACTTTCTCTCCAGCTTAAAAGATAATCGCTTGTTTCAAATTGTTGAACTTAATCTCTTGAGTGAAAAAACTATGAAAGAGATCATGGAAGTTGCTATTGTTGCAAGCAAGTGCTTAAAGCTTAGAGGGGAGGAGAGGCCTAGCATGAAGGAAGTGGAAATAGAGTTGAAAAGAATAAGGGTAACCGAGAAGCACCCATGGGGTAATGTAAGCATGAATTTGGAGGAGTCTCAATATTTACTTCATGAGACATCGAGCATTGATGAGCATGGCAATAGTAGTAAGCTTGGAAATTATGGGTACGACAGCTTAAGGGACCATGTACGCGTTGCCTTTGATGTTGCACGTTGA 2217 0.3857 MMLMLLTILLMLALVGVGVAVVDTSLPGCIDTCGNVTIPYPFGVGKSKTGENCFLEDGLNLTCQNNSLFQGNTQVLNISLQGQFDMMFFVSELCKDTKNGVANQPYLSTPAFTISSKENKFISVGCDTIGSLNSYRNGVEYSTGCLTKCGRFPYDVVNNGTCSGIGCCQVDIPLGMNNITLQTNSFNSLNITDCSYSFIAKQGFYEFSIDHLEKLPFNVLPIVIDWTVGNERCEAFRNGSLKSACMNNSYCDDVGTTYGYRCICRTGYDGNPYHPNGCQDINECKINNHTCISEDHCRNTDGSFECFCPDGQVGNGKSDGGCRPIQGKSNQTKYAVGASAGFLALLLISWIYIIYQKRNLIKQREKFFRQNGGFILQRRLSTMTTNQDPSQTAQIFTAEELKKATNNYDEGLIIGQGGFGTVFKGILANNNVVAIKKSKVVDQSQVEQFINEVIILSQINHRNVVKLLGCCLDIEVPLLVYEFVNNGNLYDNLQNENKAGNMPWETRLRIAIEVAGALSYLHSDASTTIIHRDVKSANILLDDTYTSKVSDFGASKLVPLDQAELATMVQGTFGYLDPEYMQTSNLTEKSDVYSFGVVLVELLTGQKAHSFQRPEEQQSLAIHFLSSLKDNRLFQIVELNLLSEKTMKEIMEVAIVASKCLKLRGEERPSMKEVEIELKRIRVTEKHPWGNVSMNLEESQYLLHETSSIDEHGNSSKLGNYGYDSLRDHVRVAFDVAR* 739
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g0821 738 ProSitePatterns Serine/Threonine protein kinases active-site signature. 529 541 IPR008271 GO:0004672|GO:0006468
Apr9g0821 738 SMART egf_5 232 279 IPR000742 -
Apr9g0821 738 SMART egf_5 283 323 IPR000742 -
Apr9g0821 738 SUPERFAMILY EGF/Laminin 278 316 - -
Apr9g0821 738 SUPERFAMILY Protein kinase-like (PK-like) 385 675 IPR011009 -
Apr9g0821 738 ProSitePatterns Aspartic acid and asparagine hydroxylation site. 297 308 IPR000152 -
Apr9g0821 738 Gene3D Phosphorylase Kinase; domain 1 372 483 - -
Apr9g0821 738 Gene3D Transferase(Phosphotransferase) domain 1 484 699 - -
Apr9g0821 738 ProSiteProfiles EGF-like domain profile. 280 318 IPR000742 -
Apr9g0821 738 SMART egfca_6 280 323 IPR001881 GO:0005509
Apr9g0821 738 Pfam Protein kinase domain 410 674 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr9g0821 738 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 22 709 IPR045274 GO:0007166
Apr9g0821 738 PANTHER WALL-ASSOCIATED RECEPTOR KINASE 2-LIKE ISOFORM X2 22 709 - -
Apr9g0821 738 SMART serkin_6 408 690 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr9g0821 738 ProSitePatterns Protein kinases ATP-binding region signature. 414 437 IPR017441 GO:0005524
Apr9g0821 738 ProSiteProfiles Protein kinase domain profile. 408 690 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr9g0821 738 Gene3D Laminin 231 322 - -
Apr9g0821 738 Pfam Calcium-binding EGF domain 280 322 IPR001881 GO:0005509
Apr9g0821 738 CDD STKc_IRAK 414 681 - -
Apr9g0821 738 ProSitePatterns Calcium-binding EGF-like domain signature. 280 306 IPR018097 GO:0005509
Apr9g0821 738 Pfam Wall-associated receptor kinase galacturonan-binding 29 83 IPR025287 GO:0030247
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g0821 Apr-Chr9 15833590 15837246 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr9g0821 3 738 Receptor kinase-like Gene Family AT1G21230 44.211 0.0 567
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK Apr9g0821 Pkinase 1.2e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g0821 - - gmx:100819535 906.36