Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g0819 ATGGCGCCCAAGTCATCTTTAATGATGCCATTTATGTTAATTGGTCTCATCGGTGTTGTATGTGCTTTTGTATATGATATTCAGTTTCCAGGCCATGCTACTCTCTCTGATGCCTCTTTTCCAGGAGGGGCAAATGGTAATGGGAATTACGGAACTGACACTGCATTACTAGACGAAATTTCCTATAAAAATGGTTTGATGCATAATGCGTGCTTTAGAATAGAGTGCGTGGATAAGCCTTGGTGTAAATCAGTGCCCACTGATGTTACTATTGCTGGCCCTTTTCGTCCAAATTCTATTTTGTCCTGCAATTCTCAGTCGTGCAACCCTTTGCTACAATTGTTACTGCGAAAAGGAACGTTGCTGAGAATCGCTAATGACAAAGTTACAGATACTCCAGTGATGGCTAGCAGAGTGTTCTGTGCAAAAGTAGGCGGCATAAAGTTTACAATCACAGGCCACGATAACCTCACTCGGGTTTTGCCAGAAAATATGGCAGGTGCAGGGAATATAAAAAAATTGTTTATCAAAGGGTCAGGAGGACAGCAGTGGCAACGCATGCAATGGGATGGGGACGGATACTGGCGGATCAACTGCTCCTTCGTTGGACAAAGTCTCTCTTTTCTGATCATTGCCGGTGATGATGCAAGATTGTCATGCAACACTGTATTCGACGCCCAGTGGACCACGGGCCAAACTATTGACTCTACTGGGTGTCAGTTTAAACCGAGTGAGACACACAACTAA 747 0.4418 MAPKSSLMMPFMLIGLIGVVCAFVYDIQFPGHATLSDASFPGGANGNGNYGTDTALLDEISYKNGLMHNACFRIECVDKPWCKSVPTDVTIAGPFRPNSILSCNSQSCNPLLQLLLRKGTLLRIANDKVTDTPVMASRVFCAKVGGIKFTITGHDNLTRVLPENMAGAGNIKKLFIKGSGGQQWQRMQWDGDGYWRINCSFVGQSLSFLIIAGDDARLSCNTVFDAQWTTGQTIDSTGCQFKPSETHN* 249
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g0819 248 PANTHER EXPANSIN 36 236 - -
Apr9g0819 248 Gene3D - 26 141 IPR036908 -
Apr9g0819 248 ProSiteProfiles Expansin, Cellulose-binding-like domain profile. 156 236 IPR007117 -
Apr9g0819 248 Pfam Expansin C-terminal domain 147 222 IPR007117 -
Apr9g0819 248 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 42 146 IPR007112 -
Apr9g0819 248 PRINTS Expansin signature 49 63 IPR002963 GO:0009664
Apr9g0819 248 PRINTS Expansin signature 121 134 IPR002963 GO:0009664
Apr9g0819 248 PRINTS Expansin signature 145 157 IPR002963 GO:0009664
Apr9g0819 248 PRINTS Expansin signature 157 178 IPR002963 GO:0009664
Apr9g0819 248 PRINTS Expansin signature 193 214 IPR002963 GO:0009664
Apr9g0819 248 PRINTS Expansin signature 222 238 IPR002963 GO:0009664
Apr9g0819 248 PANTHER EXPANSIN-A15 36 236 IPR002963 GO:0009664
Apr9g0819 248 Gene3D - 146 241 IPR036749 -
Apr9g0819 248 SUPERFAMILY PHL pollen allergen 145 234 IPR036749 -
Apr9g0819 248 SUPERFAMILY Barwin-like endoglucanases 26 93 IPR036908 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g0819 Apr-Chr9 15803805 15807632 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr9g0819 31 241 Expansin Gene Family AT2G40610 40.807 3.05e-34 122
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g0819 - K20628 aprc:113848471 400.979