Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g0818 ATGGAATTTGTGAATAGCCAAATGCTAAAACAACAGCAGCAACAGCATTTTCATGTGTTGGTGGTAGATGATAATGTCATTGATAGGAAGCTTTTGGAGAGGCTCTTGAGAGATTCTTCATGCAAAGCTACCTTCCTTGACTCTGGAGTCAAGGCTCTGAAATATCTTGGCCTGCTTGATGATGATATTCATAATGCTTCGTCAACTTCTCCAGAATCATTGCAACAAAACGGAATCAACGTGAATTTGATCATGACAGACTACTGCATGCCAGGAATGAGTGGCTATGATTTACTCAAACGAATCAAGGGATCTTCTTGGAAAGATGTACCAGTCGTCATTATGTCATCGGAAAATATACCATCTAGAATCAGCATGTGCTTGGAAGGAGGGGCAGAGGAGTTTCTATTGAAGCCTCTTCAGTTATCAGATTTGAAGAAGCTTCAGCCACACTTTTTGAAACCCTTTGATCATTTTAGTGAACAAGATTCTGCTGACAGATCCATAGCTTCTCACAATCACACTAATAACAATGATAAGAACAATAGTTTTAACAAAACAAAGGCAATGTCTCCGGAGCATGGTTTTAAATTGCAGTTTGCATCTACAATTGTAACTACAATATTACGGTTTTGGAACTCTCTATAA 648 0.3858 MEFVNSQMLKQQQQQHFHVLVVDDNVIDRKLLERLLRDSSCKATFLDSGVKALKYLGLLDDDIHNASSTSPESLQQNGINVNLIMTDYCMPGMSGYDLLKRIKGSSWKDVPVVIMSSENIPSRISMCLEGGAEEFLLKPLQLSDLKKLQPHFLKPFDHFSEQDSADRSIASHNHTNNNDKNNSFNKTKAMSPEHGFKLQFASTIVTTILRFWNSL* 216
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g0818 215 PANTHER TWO-COMPONENT RESPONSE REGULATOR ORR4 7 184 - -
Apr9g0818 215 ProSiteProfiles Response regulatory domain profile. 18 153 IPR001789 GO:0000160
Apr9g0818 215 MobiDBLite consensus disorder prediction 169 188 - -
Apr9g0818 215 Pfam Response regulator receiver domain 19 147 IPR001789 GO:0000160
Apr9g0818 215 CDD REC_typeA_ARR 19 148 - -
Apr9g0818 215 SUPERFAMILY CheY-like 17 163 IPR011006 -
Apr9g0818 215 MobiDBLite consensus disorder prediction 164 188 - -
Apr9g0818 215 Gene3D - 18 187 - -
Apr9g0818 215 PANTHER TWO-COMPONENT RESPONSE REGULATOR 7 184 IPR045279 GO:0009736
Apr9g0818 215 SMART REC_2 17 149 IPR001789 GO:0000160
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g0818 Apr-Chr9 15734244 15738615 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr9g0818 12 154 Response Regulator Gene Family AT2G41310 60.000 8.96e-60 185
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Apr9g0818 Response_reg 1.7e-18 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g0818 K14492 - gmx:100790440 321.242
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr9g0818 9 15734244 15738615 Apr9g0818 9 15734244 15738615 ECH