Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g0815 ATGGCATCTACCATCAACAAGAAAATGTTTGATTCAGAAGAAGCTTCAGCAATGGTTAAGGATCTAAGAGGAACGTTTGATTCTGGCAAGACTAGGAGCTACGAGTGGAGAACTTCCCAGTTAAAGGCACTTGTCAAACTAACTGAAGAGCATGAGCAAGAGATCGTTGCAGCTCTTCACTCTGACCTATCAAAGTCTGAAACTGAATCTTTCATCCAAGAGATTGCTATGTTGAAAAACTCATGTAAAGTTGCACTTAAGGAATTGAAACACTGGATGACTTCAGAAAAGGTGAAAACTTCACTCACAACTTTTCCTTCTTCAGCTGAAATAGTATCTGAACCACTAGGTGTTGTGTTGGTCATCTCTGCATGGAACTATCCATTTCTGTTGTCACTTGATCCAGTCATTGGAGCTATTGCAGCTGGTAATGCTGTGGTTCTAAAACCATCAGAAATTGCTCCTGCGACATCATCCCTTCTGGCAAAACTGTTGGGAGACTACATGGATAACTCATCTGTAAGAGTTGTTGAGGGGGCAGTTGATGAAACATCTGCTTTACTGCAGCAAAAGTGGGACAAAATTTTCTATACAGGTAATGGACGAGTGGGACGCATTGTGATGGCAGCTGCTGCAAAACACCTTACCCCGGTTGTGCTTGAGCTTGGAGGAAAATCTCCAGTTGTTGTTGATTCAAATATCAATTTACAGGTAGCAACTAGACGAATAATTGCAGGAAAGTGGGGTTGTAATAATGGACAAGCCTGCATTTCTCCCGATTATATTATAACAACAAAAGACTATGCTCCCAAATTGGTGGATGCTCTTAAGACTGAATTGGAGAAATTTTATGGAAACAATCCATTGGAATCAAAAGATTTGTCCCGTATTGTGAACTCCAACCACTTTGCTCGCTTGACAAAGCTCTTGGATGATGATAAGGTTTCTGGTAAGATTGTTTATGGAGGTGAAAAAAATGAAAGCAAATTGAGGATTAGTCCCACTGTCCTATTGGATGTCCCGCGGGATTCACTAATCATGAGTGAGGAGATATTTGGTCCTTTACTTCCCATTCTTACGGTCGATAAATTGGAAGAAAGTTTTGATGTGATCAATTCAGGACCAAAGCCTCTTGCGGCATATATATTTACAACCAACAAAAAGCTCAAGGAGCAATTTGTTATGACTGTTTCAGCTGGCGGTTTGGTTGTTAATGACACTACTCTACATCTTGCAGTTCATACTTTGCCGTTTGGGGGAGTTGGTGAGAGTGGAGTCGGTGCATACCACGGGAAGTTCTCATTTGATACTTTTAGCCACAAAAAAGCAGTTCTTTATCGCAGTTTTATGGGTGACGCATCAATAAGGTACCCTCCGTACACAAATACAAAGATGAGATTGCTGAAAGCTCTCATTGGTGGTGGCATACTTGGTATAATTCGTGCCCTGTTTGGATGGTCCTAG 1464 0.4126 MASTINKKMFDSEEASAMVKDLRGTFDSGKTRSYEWRTSQLKALVKLTEEHEQEIVAALHSDLSKSETESFIQEIAMLKNSCKVALKELKHWMTSEKVKTSLTTFPSSAEIVSEPLGVVLVISAWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLGDYMDNSSVRVVEGAVDETSALLQQKWDKIFYTGNGRVGRIVMAAAAKHLTPVVLELGGKSPVVVDSNINLQVATRRIIAGKWGCNNGQACISPDYIITTKDYAPKLVDALKTELEKFYGNNPLESKDLSRIVNSNHFARLTKLLDDDKVSGKIVYGGEKNESKLRISPTVLLDVPRDSLIMSEEIFGPLLPILTVDKLEESFDVINSGPKPLAAYIFTTNKKLKEQFVMTVSAGGLVVNDTTLHLAVHTLPFGGVGESGVGAYHGKFSFDTFSHKKAVLYRSFMGDASIRYPPYTNTKMRLLKALIGGGILGIIRALFGWS* 488
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g0815 487 PANTHER ALDEHYDE DEHYDROGENASE 6 487 - -
Apr9g0815 487 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 220 227 IPR029510 GO:0016491
Apr9g0815 487 PIRSF ALDH 3 477 IPR012394 GO:0006081
Apr9g0815 487 PANTHER ALDEHYDE DEHYDROGENASE 6 487 IPR012394 GO:0006081
Apr9g0815 487 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 224 424 IPR016163 GO:0016620
Apr9g0815 487 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 24 442 IPR016162 GO:0016491
Apr9g0815 487 CDD ALDH_F3FHI 15 446 - -
Apr9g0815 487 Pfam Aldehyde dehydrogenase family 11 444 IPR015590 GO:0016491
Apr9g0815 487 SUPERFAMILY ALDH-like 14 460 IPR016161 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g0815 Apr-Chr9 15655606 15667073 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr9g0815 71 485 Aldehyde Dehydrogenase Gene Family AT1G44170 75.359 0.0 672
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g0815 K00128 - gmx:100778722 812.372
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr9g0815 9 15655606 15667073 Apr9g0815 9 15655606 15667073 ECH