Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g0803 ATGTCCACACAGAACCGTCGCTCGTCGGTTTTTTCCTCAACGGCGTCGTCTATGGCGAAACGACACCCGTCGTTGTCGTCGGGGAAGGCGAAGGCGGTTCCTCCTCCGCACGTGGCTAGAAAGAGAGAGCCTCTCACAAACCTCACCAATTTGAAAACGGCGTTTCCTGCTCCTTCTTTGGTGTCATGTTCAACTAAAATTACCAAGACCAAGAAAGAGAATGAGGCTCCTGCGAGAACCAGCATCACAAGATCATCAATTCGGGAGAAGAAAGTACCAGCGTTGCAAAATGTTAACTCAAGCGCAGTTATTAATCCTAAGGCCAATTCTTTACCCCAAAGGAAAGGTGTTTCTCCTTGTATATCAGATGCCATGTCCGTTTCTATGGATGAGACAATGTCTTCCTGTGATTCTATTAAGAGTCCTGAAGTTGAATATATGGACAATTGTGATATTTCAGCTCTTGATTCAATTCAGATAAAGCCATTCAGCAATTTGAATAGTTCTGATACTACAGAACCTAAAGGTAATTTATGTAGTAGGGACATAATTGTTGAGTTGGGAAGAGAGGAGATTGTCAATATTGATAATGTTTACTCGGATCCGCAGCTTTGTGCTACCTATGCTTGTGACATCTACAAGAACCTACGTGAATCTGAGGAAAAGAAAAGGCCTTCCGCTAACTTCATGGAGACAATTCAGAAGGACATAAATGTCAGCATGCGCGCAATATTGATTGACTGGCTTGTTGAGGTGGCTGAGGAGTATCGGCTTGTACCTGATACGTTGTATTTGACTGTGAACTACATAGATCGGTATCTTTCAGGGAATGCTATGAATAGGCAAAGATTACAATTACTTGGTGTTGCCAGCATGATGATTGCCTCTAAATATGAGGAGATTTGTGCACCTCAGGTGGAGGAATTTTGTTATATAACTGATAACACGTACTTGAAAGAAGAGGTTTTGCAAATGGAATCTGCTGTCTTGAATTATCTGAAGTTTGAAATGACAGCCCCAACAATTAAATGTTTCTTAAGACGATTTGTTGGTGCTGCTAAAGATGTCACTGAGGTCCTTTCACTGCAACTAGAATGTCTAACCAACTATATTGCTGAATTATCTCTCTTGGAGTACAGTATGCTTTGTTATGCTCCATCACTTATAGCTGCTTCTGCAATTTTCCTGGCCAGATTTATACTTTTTCCTTCAAAGAAGCCATGGAATTCCACATTGCAGCATTACACGCTCTACCAGCCTTCTGATCTGTGTGCATGTGTAAAAGATCTCCATCGTCTTTGCTGCAACAGTCATGATTCTAATTTACCTGCAATCCGAGAGAAATACTGTCAGCACAAGTACAAGTATGTGGCCAAGAAGCGCATCCCTCCTTCAATACCTCAAGAAATTTTCCAGAATTGA 1422 0.417 MSTQNRRSSVFSSTASSMAKRHPSLSSGKAKAVPPPHVARKREPLTNLTNLKTAFPAPSLVSCSTKITKTKKENEAPARTSITRSSIREKKVPALQNVNSSAVINPKANSLPQRKGVSPCISDAMSVSMDETMSSCDSIKSPEVEYMDNCDISALDSIQIKPFSNLNSSDTTEPKGNLCSRDIIVELGREEIVNIDNVYSDPQLCATYACDIYKNLRESEEKKRPSANFMETIQKDINVSMRAILIDWLVEVAEEYRLVPDTLYLTVNYIDRYLSGNAMNRQRLQLLGVASMMIASKYEEICAPQVEEFCYITDNTYLKEEVLQMESAVLNYLKFEMTAPTIKCFLRRFVGAAKDVTEVLSLQLECLTNYIAELSLLEYSMLCYAPSLIAASAIFLARFILFPSKKPWNSTLQHYTLYQPSDLCACVKDLHRLCCNSHDSNLPAIREKYCQHKYKYVAKKRIPPSIPQEIFQN* 474
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g0803 473 MobiDBLite consensus disorder prediction 1 43 - -
Apr9g0803 473 Gene3D - 211 459 - -
Apr9g0803 473 CDD CYCLIN 338 431 IPR013763 -
Apr9g0803 473 MobiDBLite consensus disorder prediction 1 23 - -
Apr9g0803 473 PIRSF Cyclin_A_B_D_E 1 469 IPR039361 -
Apr9g0803 473 SUPERFAMILY Cyclin-like 200 337 IPR036915 -
Apr9g0803 473 SMART cyclin_7 344 432 IPR013763 -
Apr9g0803 473 SMART cyclin_7 247 331 IPR013763 -
Apr9g0803 473 SMART Cyclin_C_2 340 463 IPR004367 -
Apr9g0803 473 ProSitePatterns Cyclins signature. 242 273 IPR006671 -
Apr9g0803 473 PANTHER CYCLINS 73 472 IPR039361 -
Apr9g0803 473 CDD CYCLIN 241 330 IPR013763 -
Apr9g0803 473 Pfam Cyclin, N-terminal domain 211 337 IPR006671 -
Apr9g0803 473 Gene3D - 225 338 - -
Apr9g0803 473 SUPERFAMILY Cyclin-like 340 465 IPR036915 -
Apr9g0803 473 Pfam Cyclin, C-terminal domain 340 459 IPR004367 -
Apr9g0803 473 PANTHER CYCLIN-A1-1 73 472 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g0803 Apr-Chr9 15448095 15451728 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr9g0803 4 473 Core Cell Cycle Gene Families AT1G44110 60.084 0.0 536
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g0803 K06627 - gmx:100776207 683.33
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr9g0803 9 15448095 15451728 Apr9g0803 9 15448095 15451728 ECH
Apr9g0803 9 15448095 15451728 Apr1g0210 1 2307351 2310551 PCT