Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g0799 ATGGAAAAGCGAGTGATGCTTAATCCCCTCATCGTGTCCCTTCTCACACTTGTCGTGGCTGGTGCTGCATCTTCCTCATGCCCCATGGATCTCAGCTACGTTGATGCCATTCCTTGGAACACTTCATCGTGCAGAGACCCAATTGAGAAGGGACTCTGCTGCCAAACTCTGCTCAGTATCTTCGGCATAGGCCTGGGCCAACACCTCATAGACACTTCCTTGTTTCGACTTCCTGATGAAAACACATCCTCCTCTTGCTTATCTGATTTCCAACAAAAGCTCTCAGCCTTGTCAATCCAACCCAAGGTGTTCCCTTTATGCTTCCCTGACCCTGCCCAGTTTGTTACAAACTCTTCAGCTTGTGCAGGCATCAGAACTCTCCAAGATTGGAAGCAAAAGGTGGGGATGTCTAGTCCATTAGACACATCTTGCAATGGTGACCTTCAAGACCTAAGTCGTTGCGACAATTGCATTGCTGCTGCCTTGAGAGTCACTCACCGACTGAAAAGTATTGACCCAAATGCTAGTTCTGATTGTTTTTACTTTATAGTGTTGTATGCTGCAGCTGTTGTTAATCCCTATGGTACAACAGATTTAAGCACCACTAGTTGCATACTAGGCTTGTCAGAACCGTCTAGTACAGTAACAAAAGTTTCATCAAATAACAGAAAAAAAGTGCTGAAGCTGGTTTTTGCTTTATTGGGTGCTCTAATTGGTGTTATTATGATTGCTTCTGTAATTATAGTCTTGTACAGGAAGAGGGATAAGAGAAGGATGGAAAAGATTTATCACAGGGAAATTGAAGACAATGTTAAGGCCGGTATTTTGCCTAATACTGGCGCAAAATGGTTTCACATATCAGAGCTTGAAGGAGCCACGGATAAATTTTCACACAGGAATATAATTGGCCAAGGTGGTGATGGAGTTGTGTACAAAGGGACCCTATCAGATGGCACTTTGGTTGCTGTTAAGGAAAATCTTGATTTGGAAACTAAGGGAGATGAAGTGTTCGTCTATGAAGTGGAGATCATAAGCAAAATCAAGCACAGGAATCTTCTCGCTCTCAAGGGTTGTTGTGTTACAAGTGATAATTTGAAAGGTGAGAGGAGGTTTCTGGTTTATGATTTTATGCCTAATGGGAACCTCGGTTTCCAACTGTCTCTTGCTGGGGCTAATATGTTAACGTGGCCACAAAGAAAGAGCATAATCCTTGATGTTGCTAAGGGGCTTGCTTATTTGCATCATGAAATCAAACCCCCAATTTATCACCGTGACATAAAGGCTACAAATATACTTTTGGATTCCCAAATGAATGCTAAATTGGCTGATTTTGGTTTGGCCAAGCAAAGTAGTGAGGGCCAGTCTCATCTCAATACAAGGGTTGCTGGCACATATGGTTATGTGGCACCAGAGTATGCTCTATATGGGCAGCTTAATGACAAAAGTGATGTGTACAGTTTTGGTATTGTGATTCTCGAAATCATGAGTGGAAGAAGAGTTCTGGATTCTTCGAATTTCTCGGCAGATTCAATCACAGATTGGGTATGGACACTTGTGGAATCCGGAAAGATGGAGGAAATTTTTGATCAGTCAATCAGAGAAGGACCAAAGAAAATGAGGGAAAGGTTTGTAGTTGTTGGAATGCTTTGTGCTCATGCAACTGTGGCGTTTAGGCCTAGCATTGCTGAGGCCCTCAAGATGTTACAGGGTGACATTGACATTCCCAAATTACCTGATAGGCCAGTTCCATTGGGTCATGCCTCGTTTCAGTCTTCTGTGCTGCATGGTTTGTAG 1794 0.4303 MEKRVMLNPLIVSLLTLVVAGAASSSCPMDLSYVDAIPWNTSSCRDPIEKGLCCQTLLSIFGIGLGQHLIDTSLFRLPDENTSSSCLSDFQQKLSALSIQPKVFPLCFPDPAQFVTNSSACAGIRTLQDWKQKVGMSSPLDTSCNGDLQDLSRCDNCIAAALRVTHRLKSIDPNASSDCFYFIVLYAAAVVNPYGTTDLSTTSCILGLSEPSSTVTKVSSNNRKKVLKLVFALLGALIGVIMIASVIIVLYRKRDKRRMEKIYHREIEDNVKAGILPNTGAKWFHISELEGATDKFSHRNIIGQGGDGVVYKGTLSDGTLVAVKENLDLETKGDEVFVYEVEIISKIKHRNLLALKGCCVTSDNLKGERRFLVYDFMPNGNLGFQLSLAGANMLTWPQRKSIILDVAKGLAYLHHEIKPPIYHRDIKATNILLDSQMNAKLADFGLAKQSSEGQSHLNTRVAGTYGYVAPEYALYGQLNDKSDVYSFGIVILEIMSGRRVLDSSNFSADSITDWVWTLVESGKMEEIFDQSIREGPKKMRERFVVVGMLCAHATVAFRPSIAEALKMLQGDIDIPKLPDRPVPLGHASFQSSVLHGL* 598
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g0799 597 Gene3D Phosphorylase Kinase; domain 1 257 376 - -
Apr9g0799 597 ProSitePatterns Serine/Threonine protein kinases active-site signature. 421 433 IPR008271 GO:0004672|GO:0006468
Apr9g0799 597 PANTHER OS01G0253100 PROTEIN 12 593 IPR045271 GO:0004714|GO:0006468
Apr9g0799 597 Pfam SPARK 23 180 IPR043891 -
Apr9g0799 597 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 27 - -
Apr9g0799 597 Pfam Protein kinase domain 298 565 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr9g0799 597 Gene3D Transferase(Phosphotransferase) domain 1 377 574 - -
Apr9g0799 597 SMART serkin_6 296 568 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr9g0799 597 ProSiteProfiles Protein kinase domain profile. 296 555 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr9g0799 597 PANTHER RECEPTOR-LIKE PROTEIN KINASE-RELATED 12 593 - -
Apr9g0799 597 SUPERFAMILY Protein kinase-like (PK-like) 278 568 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g0799 Apr-Chr9 15333972 15335930 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr9g0799 16 590 Receptor kinase-like Gene Family AT1G11050 50.505 0.0 569
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RKF3 Apr9g0799 Pkinase 2.9e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g0799 - - ccaj:109788171 857.44