Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g0798 ATGGCCACGCAGGTGATCCTTCACCTCCTCGTGTTCCTCCTCACAGTTCTCATAGCTGTTGCTGAATCTTCCTCTTGCCCCATGGATCTCAGCTACGTTGATACCATTCCCTGGAACACTTCATCATGCAAAGACCCAATTGATAAAAACCGCTGCTGCAATACTCTGCGTAGTGTCCTTGGCATAGGCCTTGCTCAACGCCTCAAAGACACTTCCATGTTTGAATTTTCTGATGAAAACACTTCCTCCTCTTGCTTGTCTGATTTCAAACTCCGGCTCAAAGCCTTGTCGATCCAACCACAGATTGTCCCTTCTTGCTTCCCTAACCCCTCAACTTTTGTTGTTAACTCTTCAAGTTGTGCAGGGATTATAACTACCCAAGATTGGAAGCAAAAGGTGGGGTTCGACAGCGCATTAGATTCTTCTTGCAATGGTGACCTTAAGGATAAAACTCGTTGCAGAATTTGTGCAGATGCTGGCAAGCAAGTTACTTCTCTTTTGACCAAAATTGACCCAAAAGCTAGTCCCATAAAATGTTTTTACTTTATAGTGTTATATGCTGCAGCTGTTGTTAATAAGTTTGGTGTAACTGATATAAGCACCACTAGTTGCATACTGGGCCTGCCACAAGTGTCTAGTGCGGAAACAAAAGGGTCTTCAGATAACAAAGAAAAAGTGTTGAAGCTGGGGTTTGCGTCATTGGGTGCTGTTATTTGTGTTCTGCTTGTTTTTGTAGGGATAATTGTGTGCAGGAAGTGGGATAAGAGAAGGAAGGAAAGTGTTTATCATAGGGAGATTGAGAACAATGTCAGGGCCAGTGTTTTGCCTAATACTGGTGTGAAATGGTTTGATATATCAGAGCTTGAACGTGCCACAAGTAAGTTTTCGGAGAAGAATATGGCTGGTAAAGGTGGTGATGGGGTTGTGTATAAAGGGAAACTTTCAGATGGCACTTCGGTTGCAATTAAGGAAAATTTTGAATTGGAGACTAAAGGGGATGAAGAGTTCTGCTATGAAGTGGAGATCATAAGCAAAATCAAGCACAGGAATTTGCTCGCTCTTCGGGGTTGTTGCATTTCAAGTGATAAATTGAAAGGTAAAAGGAGGTTTCTGGTTTATGATTATATGCCTAATGGGAACCTCTGTTACCAATTGTCTCTTTCTGGGGCTAATAGGTTAACATGGCCTCAAAGAAAGAACATAATACTTGATGTGGCTAAAGGGCTTGCTTATTTGCACTATGAAATCAAACCCCCAATTTATCACCGTGACATAAAGGCCACCAATGTACTTCTGGATTCAAAAATGAATGCTAAATTGGCTGATTTTGGCTTGGCTAGGGAAGGTAGTGAAGAGCAATCTCATGTCACAACAAGGGTTGCTGGCACATATGGTTATGTGGCACCAGAGTATGCTCTATATGGACAACTAACAGAGAAAAGTGATGTGTACAGTTTTGGTATTGTGATTCTTGAAATCATGAGTGGAAGAAAAGTGCTTTCTACTTTGAATGCTTACGCTGATTCAATCACGGATTGGGTATGGACACTTGTGGAATCAGGAAAAATAGAGGAAATTTTTGATCCGTCTATAAGAGAAGAAGGGCCAGCAAAAATTAAGGAAAGGTTCGTTCTTGTTGGAATGCTTTGTGCTCATGCTGTGGTGGCGCTGAGACCTACCATTGCTGAGGCCCTTAAGATGTTAGAGGGTGACATTGACATTCCCAAATTACCTGAGAGGCCAGTACCATTGGGTCACGCATCTTTTCAATCTTCTCTGTTACATGGTTTGCAAAGAAGTGGCCGAAGATCTACGCCATATTCTGCATCTAGTTCTAGTATGAGCAATACATGGGTATAA 1860 0.4204 MATQVILHLLVFLLTVLIAVAESSSCPMDLSYVDTIPWNTSSCKDPIDKNRCCNTLRSVLGIGLAQRLKDTSMFEFSDENTSSSCLSDFKLRLKALSIQPQIVPSCFPNPSTFVVNSSSCAGIITTQDWKQKVGFDSALDSSCNGDLKDKTRCRICADAGKQVTSLLTKIDPKASPIKCFYFIVLYAAAVVNKFGVTDISTTSCILGLPQVSSAETKGSSDNKEKVLKLGFASLGAVICVLLVFVGIIVCRKWDKRRKESVYHREIENNVRASVLPNTGVKWFDISELERATSKFSEKNMAGKGGDGVVYKGKLSDGTSVAIKENFELETKGDEEFCYEVEIISKIKHRNLLALRGCCISSDKLKGKRRFLVYDYMPNGNLCYQLSLSGANRLTWPQRKNIILDVAKGLAYLHYEIKPPIYHRDIKATNVLLDSKMNAKLADFGLAREGSEEQSHVTTRVAGTYGYVAPEYALYGQLTEKSDVYSFGIVILEIMSGRKVLSTLNAYADSITDWVWTLVESGKIEEIFDPSIREEGPAKIKERFVLVGMLCAHAVVALRPTIAEALKMLEGDIDIPKLPERPVPLGHASFQSSLLHGLQRSGRRSTPYSASSSSMSNTWV* 620
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g0798 619 Gene3D Transferase(Phosphotransferase) domain 1 376 574 - -
Apr9g0798 619 ProSiteProfiles Protein kinase domain profile. 295 555 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr9g0798 619 SMART serkin_6 295 568 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr9g0798 619 CDD STKc_IRAK 302 570 - -
Apr9g0798 619 PANTHER RECEPTOR-LIKE PROTEIN KINASE-RELATED 11 597 - -
Apr9g0798 619 SUPERFAMILY Protein kinase-like (PK-like) 279 585 IPR011009 -
Apr9g0798 619 Pfam Protein kinase domain 297 566 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr9g0798 619 PANTHER OS01G0253100 PROTEIN 11 597 IPR045271 GO:0004714|GO:0006468
Apr9g0798 619 Gene3D Phosphorylase Kinase; domain 1 255 375 - -
Apr9g0798 619 MobiDBLite consensus disorder prediction 600 619 - -
Apr9g0798 619 ProSitePatterns Serine/Threonine protein kinases active-site signature. 420 432 IPR008271 GO:0004672|GO:0006468
Apr9g0798 619 Pfam SPARK 22 174 IPR043891 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g0798 Apr-Chr9 15324385 15328250 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr9g0798 15 598 Receptor kinase-like Gene Family AT1G11050 49.589 0.0 550
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RKF3 Apr9g0798 Pkinase 5.7e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g0798 - - gmx:100800481 874.004
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr9g0798 9 15324385 15328250 Apr9g0798 9 15324385 15328250 ECH