Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g0797 ATGGATAAACAATTAACTTTCCTTCCCCTCCTCATCTCCCTCTTCACCATTCTCACACATAGCACTTCTGCTTCCTCATCATGCCCCATGGACCTCACCTACGTTCAATCCTACCCCTGGAACACTTCAACATGCAGACACCCAATTGACAAACAACCCTGCTGCCTCACTCTGTTGAGCATCTTTGGCATAGGTCTCGCCAAACACCTCAAAGAAACCAGCTTTTTTCAACTTCCCAATGAAAACTCTTCCTCAGCTTGCTTATCTGATTTCCAACTCAAGCTCAAAGCCTTGTCAATTCAACCATCTTTGGTCCCTTCTTGCTTCCCTAACCCATCACAGTTTGTTACTAACTCTTCAACTTGTGCAGGTATTAGAACTACCCAAGATTGGAAACAAAAGGTGGGTTTAATTAGCCCTTTAGACACTTATTGCAATGGTGACCTTAGTGACAAAACTCGTTGTGACAATTGCATTAGCGAGGGCTTAAAACTCGCTTCTCGGCTTATTACTATTGACCCAAATGCTAGTGCCACTGCTTGTTTTTCCTTTGCTTCGTTATATGCTGCTGCTTTTGTTAATCCCTATGGTACAATAGATGTTACCACCACTGGTTGCCTATTAAGCCTTCCACTCTCTAGTGGGGCAACAAAAGAGTCTTCGAATAATAGAGAAAAAGTGTTGAAGCTTGTTTTCACCCTATTGGGTGTTGTTATTGGTGTTTTGCTTGCTTTTGTAGGGATCATTGTGTACAAAAAGTGGGATAAGAGAAGTAGGGAAAGGGTTTATCATAGGGAAATTGAGAACAATGTTAGGGCCAGTGTTTTGCCTAATACTGGGGTGAAATGGTTTCATATATCTGAGCTTGAGCGTGCCACGAGTAAATTTTCCAAGAAGAATATGATTGGTAAAGGCGGTGATGGTGTTGTGTATAAAGGGAAACTTTCTGATGGGACTTTGGTTGCAATTAAGGAACATTTTGATTTAGAAAATAAAGGGGATGAAGAGTTCTGTTACGAAGTGGAGATCATAAGCAAAATTAAGCACAGGAATCTTCTTGCTCTGAAAGGTTGTTGCATTTCAAGTGATAAATTGAAAGGTAAGAGGAGGTTTCTGGTTTATGATTATATGCCGAATGGGAACCTCTGTTACCAATTGTCACTTGCCGGGGCTAATAGGTTAACATGGCCACAAAGAAAGAATATAATACTTGATGTGGCTAAAGGGCTTGCTTATTTGCATTATGAAATCAAACCCCCAATTTATCACCGTGACATAAAGGCTACCAACGTACTTTTGGATTCCAAAATGAATGCTAAAGTGGCTGATTTTGGCTTGGCAAGGGAATCAATCACGGATTGGGTATGGACACTTGCGGAATCAGGAAAAATGGATGAAATTTTTTATCAGTCAATAAAAGAAGAAGGGCCAGCAAAAGTTAAGGAAAGGTTTGTTCATGTTGGAATGCTTTGTGCTCATGCTGTGGTGGCATTAAGGCCTACTATTGCTGAGGCTCTCAAAATGTTAGAAGGTGATGTTGACATTCCCAAATTACCTGAAAGGCCAGTGCCACTGGGTCATGCTTCGTTTCAATCTTCTTTGTTGCATGGTTTGCAGAGAAGTGGAAGATCTTCACAACACATTTCATCTTATTGA 1656 0.4088 MDKQLTFLPLLISLFTILTHSTSASSSCPMDLTYVQSYPWNTSTCRHPIDKQPCCLTLLSIFGIGLAKHLKETSFFQLPNENSSSACLSDFQLKLKALSIQPSLVPSCFPNPSQFVTNSSTCAGIRTTQDWKQKVGLISPLDTYCNGDLSDKTRCDNCISEGLKLASRLITIDPNASATACFSFASLYAAAFVNPYGTIDVTTTGCLLSLPLSSGATKESSNNREKVLKLVFTLLGVVIGVLLAFVGIIVYKKWDKRSRERVYHREIENNVRASVLPNTGVKWFHISELERATSKFSKKNMIGKGGDGVVYKGKLSDGTLVAIKEHFDLENKGDEEFCYEVEIISKIKHRNLLALKGCCISSDKLKGKRRFLVYDYMPNGNLCYQLSLAGANRLTWPQRKNIILDVAKGLAYLHYEIKPPIYHRDIKATNVLLDSKMNAKVADFGLARESITDWVWTLAESGKMDEIFYQSIKEEGPAKVKERFVHVGMLCAHAVVALRPTIAEALKMLEGDVDIPKLPERPVPLGHASFQSSLLHGLQRSGRSSQHISSY* 552
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g0797 551 PANTHER RECEPTOR-LIKE PROTEIN KINASE-RELATED 9 450 - -
Apr9g0797 551 PANTHER RECEPTOR-LIKE PROTEIN KINASE-RELATED 451 537 - -
Apr9g0797 551 SMART serkin_6 296 509 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr9g0797 551 ProSiteProfiles Protein kinase domain profile. 296 551 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr9g0797 551 Pfam SPARK 23 181 IPR043891 -
Apr9g0797 551 ProSitePatterns Serine/Threonine protein kinases active-site signature. 421 433 IPR008271 GO:0004672|GO:0006468
Apr9g0797 551 PANTHER OS01G0253100 PROTEIN 9 450 IPR045271 GO:0004714|GO:0006468
Apr9g0797 551 PANTHER OS01G0253100 PROTEIN 451 537 IPR045271 GO:0004714|GO:0006468
Apr9g0797 551 SUPERFAMILY Protein kinase-like (PK-like) 274 509 IPR011009 -
Apr9g0797 551 Gene3D Transferase(Phosphotransferase) domain 1 450 515 - -
Apr9g0797 551 Gene3D Transferase(Phosphotransferase) domain 1 377 449 - -
Apr9g0797 551 Gene3D Phosphorylase Kinase; domain 1 256 376 - -
Apr9g0797 551 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 28 - -
Apr9g0797 551 Pfam Protein tyrosine and serine/threonine kinase 298 451 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g0797 Apr-Chr9 15312141 15313974 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr9g0797 451 539 Receptor kinase-like Gene Family AT1G11050 51.456 1.48e-25 108
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RKF3 Apr9g0797 PK_Tyr_Ser-Thr 1.6e-27 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g0797 - - aprc:113874294 1104.74