Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g0796 ATGGATGAGCAAGTGATTCTCCTTCCCCTTCTCATGTCCCTCTTCACCATTGCTGCATCTGCATCATGCCCCATGGATCTCAGCTACGTTGATAACTTTCCATGGGACACCTCCAGCTGTAGAGACCCAATTGATAAGGAACACTGTTGCCAAGCTCTTCTCAGTGTATTTGGCATAGGATTAGCCCAACACCTCAAAGAAACCTCTTTGTTTCAACTTCCTGATGAAAACACTTCCACAACTTGCTTATCTGATTTCAAGCTCAAACTCACATCCTTGTCAATTCAACCATCTTTGGTCTCTTCTTGCTTCCCTAACCCGTCACAGTTTGTTACTAACTCTTCAACGTGTGCAGGTATTAGAACTATCCAAGATTGGAAGCAAAAAGTGGGGTTGATTAGCCCATTAGACACTTCTTGCAAGGGTGGACTTGGGGATCAAACTCTCTGCAGTATTTGTTCTGATGCTGGCTTGAAAGTGACTTCACAGTTGAATGGTATTGATCCAAATGCCACAAAGTGTTTTTACTTCACTGTTTTGTATGCTACAGCTGTTGTTAATGAGTTTGGTCCAACAGATTTAGGCACTGCTAGTTGCATACTTGGCATGCCACTGTCCGCAAAAGGGTCATCAAATAGAAAACATGTGCTTAAACTTGTTTTTGCTTTATTGGGTGCTGTTATTGGTGTTCTGCTTGCTATTGTATTGATAGTTGTGTATAGGAAGTGGGATATGAGAAGGAAGGAAAATATTTATCATAGGTCAATTGAGAACAGTGTTAGGGACAGTGTTTTGCCTAACACTGGCGCTAAGTGGTTTCACATATCTGAGCTTGAACGTGCCACTAATAAATTTTCACAGAAGAATATGGTTGGTCAAGGTGGTGATGGGGTTGTGTACAAAGGGACTCTTTCAGATGGCACTGTAGTGGCAGTGAAGGAGATTTTTGACTTGGAAACTAAAGGGGATGAAGAGTTCTGCTATGAAGTGGAGATCATAAGCAAAATAAAGCATAGGAATCTGCTTGCTCTTCGGGGTTGTTGTGTTGCAAGTGATAATTTGAAAGGTAAGAGGAGGTTTTTGGTTTATGATTTCATGCCTAATGGTAGCCTAAGTTATCAATTGTCAATTGCTGGGGCTAATAGGTTAACATGGCCACAAAGAAAGAATATAATACTTGATGTGGCTAAAGGGCTTGCTTATTTGCATTATGAAATTAAACCCCCAATTTATCACCGTGACATAAAGGCTACCAATATACTTTTGGATTCTAAAATGAAAGCCAAAGTGGCAGATTTTGGCTTGGCCAAGCAAGGTAATGAAGGCCAGTCTCATCTCACAACAAGGGTTGCTGGCACATATGGTTATTTGGCACCAGAATATGCTCTATATGGGCAACTAACAGAGAAAAGCGATGTGTACAGTTTTGGCATTGTGATTCTTGAAATCATGAGTGGGAGAAAAGTGCTTGATACATTGAATTCATCTGTGGTTTTAATCACGGATTGGGCATGGATGCTTGCAAAATCAGGGAAAGTGGAGGAAATTTTTGATGGGTCAATAAGAAAAGAAGGGCCAGAAAAAATCATGGAAAGGTTTGTTCTTGTTGGGATACTTTGTGCTCATGCAATGGTGGCATTGAGGCCTACAATTGCAGAGGCCCTTAAGATGTTAGAGGGTGACATTGACATCCCCAGTTTACCTGATAGGCCAGTACCACTGGGTCATGAGTCCTTCCAATCTTCACTGTTGTATGGTTTTCAAAGAAGTGGAAGATCAACTCCATATATTTCATCTTATTCAACAAGTATGAGCACAATATAG 1824 0.4095 MDEQVILLPLLMSLFTIAASASCPMDLSYVDNFPWDTSSCRDPIDKEHCCQALLSVFGIGLAQHLKETSLFQLPDENTSTTCLSDFKLKLTSLSIQPSLVSSCFPNPSQFVTNSSTCAGIRTIQDWKQKVGLISPLDTSCKGGLGDQTLCSICSDAGLKVTSQLNGIDPNATKCFYFTVLYATAVVNEFGPTDLGTASCILGMPLSAKGSSNRKHVLKLVFALLGAVIGVLLAIVLIVVYRKWDMRRKENIYHRSIENSVRDSVLPNTGAKWFHISELERATNKFSQKNMVGQGGDGVVYKGTLSDGTVVAVKEIFDLETKGDEEFCYEVEIISKIKHRNLLALRGCCVASDNLKGKRRFLVYDFMPNGSLSYQLSIAGANRLTWPQRKNIILDVAKGLAYLHYEIKPPIYHRDIKATNILLDSKMKAKVADFGLAKQGNEGQSHLTTRVAGTYGYLAPEYALYGQLTEKSDVYSFGIVILEIMSGRKVLDTLNSSVVLITDWAWMLAKSGKVEEIFDGSIRKEGPEKIMERFVLVGILCAHAMVALRPTIAEALKMLEGDIDIPSLPDRPVPLGHESFQSSLLYGFQRSGRSTPYISSYSTSMSTI* 608
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g0796 607 ProSitePatterns Serine/Threonine protein kinases active-site signature. 410 422 IPR008271 GO:0004672|GO:0006468
Apr9g0796 607 SMART serkin_6 285 534 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr9g0796 607 SUPERFAMILY Protein kinase-like (PK-like) 270 578 IPR011009 -
Apr9g0796 607 Gene3D Phosphorylase Kinase; domain 1 246 365 - -
Apr9g0796 607 Pfam SPARK 19 174 IPR043891 -
Apr9g0796 607 PANTHER RECEPTOR-LIKE PROTEIN KINASE-RELATED 18 588 - -
Apr9g0796 607 CDD STKc_IRAK 291 560 - -
Apr9g0796 607 ProSiteProfiles Protein kinase domain profile. 285 545 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr9g0796 607 PANTHER OS01G0253100 PROTEIN 18 588 IPR045271 GO:0004714|GO:0006468
Apr9g0796 607 Gene3D Transferase(Phosphotransferase) domain 1 366 564 - -
Apr9g0796 607 Pfam Protein kinase domain 286 499 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g0796 Apr-Chr9 15307983 15310219 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr9g0796 18 580 Receptor kinase-like Gene Family AT1G11050 53.345 0.0 590
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RKF3 Apr9g0796 Pkinase 2e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g0796 - - ccaj:109788171 1006.9