Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g0795 ATGAGAAACCCAACAGCAACAGCAACAGAAACAAACAAGAACAAGAAGAGTAATGACAGTGGTGGTAGTAACAGCAATAACAATGGCACTGTTACTCCATGTTGCAGCAAGGTTGGGTTGAAGAGAGGGCCATGGACACCAGAAGAAGATGAGGTGTTAGCGAATTACATAAAGAAAGAAGGAGAAGGGCGTTGGAGAACACTCCCCAAAAGAGCTGGACTTCACCGATGTGGTAAGAGTTGTCGCCTCCGTTGGATGAACTATCTTCGCCCTTCCGTCAAACGGGGCCACATCGCTCCAGATGAGGAAGATCTCATCCTTCGTCTTCATCGCCTTCTTGGAAATAGGTGGTCTTTGATTGCTGGGAGAATTCCTGGGCGAACGGATAATGAGATAAAGAATTATTGGAACACCCATCTAAGCAAGAAGCTTATTAGCCAAGGGATTGATCCCAGAACCCATAAGCCTTTGAACCCACCTTCCGTTCCTTCTTCTTCTATTTCTACTGTTCCATCTTCTAAATCTGTTCCTATAATTATTGGGAATCATCAGAACCCTTCTACTCGTCAGGATCTTATTATTAATGTAAACCAAGAAATTGATCTTTTGGGTCAATATCAACAACTTCAAGGAGCTGGGAATATAGTAAATAATGATAATGCATATGGTGATGACAATATTAATCCAGCAACTACTGGCACCGACGATGTTTCTGCAATGGGTTTCATTAACAATGAGGAATGCGAGGATGATATCAATGTGAATTATTGTTCTGACGATGTCTTTTCTTCCTTCCTCAACTCTTTGATCAACGAGGATGCTTTTGCATCTCAGCAGCACCACATGCAATCAGAACCACCCAATGGGCATGGCATTCCACTGCCTAATTCTGATGATCGTATTCAGGATCCTTTGATTTCAATCACCACTTCATCTGCAACACAAGCATATGATGATGGACTTGGTGTTCTGTGGGAATCGCCACTCATGCCTGCTACTTTCAGTCAAAATGACCCCAACACCAAGAGGGTTCTTGATCAACCTGAATAG 1050 0.4295 MRNPTATATETNKNKKSNDSGGSNSNNNGTVTPCCSKVGLKRGPWTPEEDEVLANYIKKEGEGRWRTLPKRAGLHRCGKSCRLRWMNYLRPSVKRGHIAPDEEDLILRLHRLLGNRWSLIAGRIPGRTDNEIKNYWNTHLSKKLISQGIDPRTHKPLNPPSVPSSSISTVPSSKSVPIIIGNHQNPSTRQDLIINVNQEIDLLGQYQQLQGAGNIVNNDNAYGDDNINPATTGTDDVSAMGFINNEECEDDINVNYCSDDVFSSFLNSLINEDAFASQQHHMQSEPPNGHGIPLPNSDDRIQDPLISITTSSATQAYDDGLGVLWESPLMPATFSQNDPNTKRVLDQPE* 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g0795 349 CDD SANT 100 140 IPR001005 -
Apr9g0795 349 CDD SANT 44 89 IPR001005 -
Apr9g0795 349 MobiDBLite consensus disorder prediction 330 349 - -
Apr9g0795 349 ProSiteProfiles Myb-like domain profile. 90 140 IPR001005 -
Apr9g0795 349 SMART sant 94 142 IPR001005 -
Apr9g0795 349 SMART sant 41 91 IPR001005 -
Apr9g0795 349 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 90 144 IPR017930 -
Apr9g0795 349 MobiDBLite consensus disorder prediction 277 302 - -
Apr9g0795 349 MobiDBLite consensus disorder prediction 1 33 - -
Apr9g0795 349 Pfam Myb-like DNA-binding domain 42 89 IPR001005 -
Apr9g0795 349 Pfam Myb-like DNA-binding domain 100 140 IPR001005 -
Apr9g0795 349 ProSiteProfiles Myb-like domain profile. 37 89 IPR001005 -
Apr9g0795 349 MobiDBLite consensus disorder prediction 149 169 - -
Apr9g0795 349 PANTHER TRANSCRIPTION REPRESSOR MYB5-LIKE 25 288 - -
Apr9g0795 349 SUPERFAMILY Homeodomain-like 39 136 IPR009057 -
Apr9g0795 349 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 25 288 - -
Apr9g0795 349 Gene3D - 99 160 - -
Apr9g0795 349 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 37 89 IPR017930 -
Apr9g0795 349 Gene3D - 39 95 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g0795 Apr-Chr9 15289247 15290476 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr9g0795 31 312 MYB Transcription Factor Family AT3G13540 50.699 1.24e-84 254
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Apr9g0795 Myb_DNA-binding 1.6e-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g0795 K09422 - gmx:100797847 419.083