Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Apr9g0788 | ATGATGACCATGAATAAAGGGTCACTTGATTACTGGAGGAACTACTTTAGAGCTTCAAACTCAGACATATTTGACATCATTGGCCATGCGATCATGGTGGCTGCTTCTGATTGCCCAAAGGAGTTCAGGTTGAGGAGAGATGGGATAGCAGAGAGGTTGTTCTCTTGCAGGTTGAGTCGCTGTTTGGGGTGTGATAGAGTGGAGTTGTCTGTGTCAATGGATGATGAAGATGGTGATGATGAAGGTGGTAGTGGTGGTGGTGGTGGTCGCAAGAGTGACTTTGATGGGGATGGTGCTGAGTTTGAGTTTGAAGCAGGTGCAAGTAAGGAGAGCAAGGTCAATAGTAGTAGAGATGATCATGGAGAGATGAACCTGAATCAAGTTAGCAATTACAGCTATGGGGAAGCTGAGGCATTGACTGATGAGATTGAAGAAGAGTCTAAGCATGTTGAGGAGGTGTTCAGGATCAAGGAGATTTTGCTTAACTATGAAGAAGAGTCTGATTCAGTGCTATTGGATTCATTGAGGAGGCTTAAGCTAATGGAACTCACTGTGGATCTTCTGAAGGCAACTGAGATTGGGAAGGCTGTCAATCCTCTGCGAAAGCATGGATCAAGGGACATTTGTCAACTAGCACGGACTCTTATAGATGGTTGGAAGGAAATGGTGGATGCATGGGTCAAGGCTACCCCACCTATTACAGGCTCAGAAGGTACACCAGATTCAGTAAATCCATCTGTTGTTGATGATGAAGAAGGGCTTCCATCACCTCCTATGGATGAAGGGGCTTTATTTGCTGCTCCAACTGGTTCAATGGAACTCTCACAGTTCTTTGATGGCATGGATGATGACGGAAATCCTCAACAGAGTGGGGAATTCATCAAGAACCGTGAAGATGGCAGAAGACCATCTCTCAGCAGTCACAATACAATGAACAGGAAACCTCAAGCTTCAAATGAGACAAACATCATTGCTAAGGACAGTAAGGGTCAAAAAACAAAGAAAAGTGAGGCGGCTATGAATCTAAATAAACCAGTATTTACTGATTCTGGCCCTGGCAGACCGCCAAATTCAACCATACAGAAAAAAGTCAATACTGAAGCCAAGATGCAACAAAATACAGTGAAGAGTGCTGTCCCCAAAAAGCCTCCTCATGTTCGTCAGCTAGATAAACTCAAGTGTTCCGATGATGCTGCAGTCCAAGTGAAGTTAGAAGCCACTAAGAGGAAACTTCAAGAGCGGTATCAACAAGCTGAAAATGCTAAGAGGCAGAGGACAGTACAGGTTATGGAGTTGCATGATCTGCCCAGGCAAGGGACTGGCCACAGAAATCCACACGCTAAACCTGGAAATCACAAGAGGCAATGGGCGCACGCGCTTGGACGAAGATAG | 1392 | 0.4519 | MMTMNKGSLDYWRNYFRASNSDIFDIIGHAIMVAASDCPKEFRLRRDGIAERLFSCRLSRCLGCDRVELSVSMDDEDGDDEGGSGGGGGRKSDFDGDGAEFEFEAGASKESKVNSSRDDHGEMNLNQVSNYSYGEAEALTDEIEEESKHVEEVFRIKEILLNYEEESDSVLLDSLRRLKLMELTVDLLKATEIGKAVNPLRKHGSRDICQLARTLIDGWKEMVDAWVKATPPITGSEGTPDSVNPSVVDDEEGLPSPPMDEGALFAAPTGSMELSQFFDGMDDDGNPQQSGEFIKNREDGRRPSLSSHNTMNRKPQASNETNIIAKDSKGQKTKKSEAAMNLNKPVFTDSGPGRPPNSTIQKKVNTEAKMQQNTVKSAVPKKPPHVRQLDKLKCSDDAAVQVKLEATKRKLQERYQQAENAKRQRTVQVMELHDLPRQGTGHRNPHAKPGNHKRQWAHALGRR* | 464 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Apr9g0788 | 463 | MobiDBLite | consensus disorder prediction | 72 | 93 | - | - | |
Apr9g0788 | 463 | MobiDBLite | consensus disorder prediction | 105 | 119 | - | - | |
Apr9g0788 | 463 | Pfam | TFIIS helical bundle-like domain | 175 | 223 | IPR017923 | - | |
Apr9g0788 | 463 | MobiDBLite | consensus disorder prediction | 277 | 337 | - | - | |
Apr9g0788 | 463 | ProSiteProfiles | TFIIS N-terminal domain profile. | 151 | 226 | IPR017923 | - | |
Apr9g0788 | 463 | SMART | TFS2_5 | 150 | 225 | IPR003617 | GO:0005634 | |
Apr9g0788 | 463 | MobiDBLite | consensus disorder prediction | 305 | 326 | - | - | |
Apr9g0788 | 463 | MobiDBLite | consensus disorder prediction | 231 | 255 | - | - | |
Apr9g0788 | 463 | SUPERFAMILY | Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 | 149 | 237 | IPR035441 | - | |
Apr9g0788 | 463 | PANTHER | MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 26A-RELATED | 4 | 459 | IPR044805 | - | |
Apr9g0788 | 463 | PANTHER | MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 26A-RELATED | 4 | 459 | - | - | |
Apr9g0788 | 463 | Coils | Coil | 401 | 428 | - | - | |
Apr9g0788 | 463 | Gene3D | Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 | 141 | 233 | IPR035441 | - | |
Apr9g0788 | 463 | MobiDBLite | consensus disorder prediction | 105 | 125 | - | - | |
Apr9g0788 | 463 | MobiDBLite | consensus disorder prediction | 446 | 463 | - | - | |
Apr9g0788 | 463 | MobiDBLite | consensus disorder prediction | 435 | 463 | - | - | |
Apr9g0788 | 463 | CDD | TFIIS_I | 151 | 224 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Apr9g0788 | Apr-Chr9 | 14902265 | 14906201 | Dispersed/Transposed |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TR | IWS1 | Apr9g0788 | Med26 | 1.6e-10 | No_clan |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Apr9g0788 | - | - | gmx:100775579 | 722.235 |