Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g0779 ATGAAAATGCTGCAACCCGCCACCGCCGGAGAAGCCAGATACGGCGGAGCCGATGGCCGGACGGTGGTGGTGGGTGTGAAGATGGACTCTAACAGCACCGAGTTGCTCACTTGGGCTTTGTTTAAAGTGGCTCAGCCTGGTGATGTCGTGTTTGCTCTTCATGTTCTTGGAAATGATGAAATTGTGAATCGAGATGGGAAATCCTCTCTGTTTTCGCTTGTGAAAGCATTTGACTCTGTGCTAGCTGTTTATGAAGGATTCTGCAATTTGAAGCAGGTGGATCTTAAGCTCAAAATATGCCGTGGTTCATCAGTGAGGAAAATTCTGGTTCGAGAAGCCGTTACTTATTCTGCATCTCACATCATAGTTGGAACTCCTCAAGGTCTTCATAAAATTCGGCCATGTATATCTGTAGCAAGGTACTGTGCTAAGAAGCTATCCAAGGATTGTTGGGTTCTTGCTGTTAATAATGGGAAAGTTGTGTTCAAGAGAGATGGCTCACCAGCAACTCGTTCTGACTTGAAAGGACTTGATGGGGATCACAGAAATGGGTTGCTAGGTTCGATTCAATGGAAACTCAGCAAGAGTTCAAAAGTGCTAGATGATGATGGTACAGGGTTACATGATAAGGGTAGTGGCCAATATTCAGATCACAGCTTAGCTAAGGCTTTTATGGATTCTAAGGAATTTATTGGGAAGAAGAGGTGTTCTATTTGTGCTTCAACCCCAGCATTGTTTGATTCACCTTGTAACCATTTGGCAGAAGAGTCTTGTGGTGATGGTTGTAATGAGAACTCTTTGGCTTTAGTGCCTGTGAAGACCAATGATGCTGCATCTAGAATGACCACTTTGCATGGTAGAGAAGTAACTGAATTAAAACCAGGTTGGCCATTGCTACATAGAGCAATTTTATCTGATAGGCAATGTTCTGAAAGATCATTGTTGCGCCAGATCTCTGTGGTACAATGGGTAATGCAGTTTCCCTCTAGGAATCTTTCATATGCTGCAAACCATGGCCTTAAAACAAACAATTGTGACCGAGATAAAGATCAATTTTTGGCTCTAGATAGCAAGAGTGGTGCTCTAGTTCCAGTGGATGCTGAAATAGGGGCTGATTCTTCGCCTGAACATAGTTCAAGAAAAGTTCCTAAGGAATTGGACGGCTTCCACGAGAAGTACTCGTCGACTTGCAGATTGTTCAAGTACCAAGAACTTGTATCAGCAACATCAAATTTCTTGCCTGAAAATCTGATTGGGAAAGGAGGAAGTAGTCAGGTTTTTAGAGGCTGCCTTCCTGATGGCAAGGAACTTGCTGTTAAGATCTTAAAGCCTTCTGATGATGTTCTGAAAGAGTTTGTTCTAGAAATAGAAATTATCACCACCTTGCATCACAAAAACATAATTTCACTCCTTGGGTTCTGCTTTGAGGATGGAAATCTTCTTTTGGTCTATGATTTTTTATCAAGAGGAAGCCTTGAAGAGAACCTTCATGGTAAGAAAAATCCACTTGTGTTTGGTTGGGCTGAGAGATATAAGGTGGCAATGGGTGTTGCTGAGGCTTTGGAGTATCTACACAACATTGAAGGGCAATCTGTGATCCATCGCGATGTAAAATCATCAAATGTTTTATTATCTGAGGATTTCGAACCCCAGCTCTCTGACTTTGGACTTGCTAAATGGGCATCTAGTTCATCACATATAACCTGCACAGATGTTGCTGGAACCTTTGGTTACATGGCTCCTGAGTACTTCATGTATGGTAAAGTAAATGATAAGATTGATGTCTATGCATTTGGTGTTGTGCTTCTTGAGCTTCTTTCAGGGAGAAAGCCCATAAGTGGTGATTATCCCAAAGGTCAAGAAAGCCTTGTCATGTGGGCTAGTCCAATTATAAATAGTGGAAAGGTGTCACAATTGTTGGATCCTAGTTTGGGTAATAGTTATGATCATGAAGAGATGGAAAGAATGGTCTTAGCAGCCACACTTTGTCTCAGACGTGCTCCAAGAGCTAGGCCTCAAATGAGCCTTATCTCTAAGCTCCTTGGAGGTGATGCTGATGTAATCAAGTGGGCAAGACTAGAAGTGAGTGCTTTGGAAGTACCAGAAATGCTTGATGATGAAGCTTGGCCACCTTCCAATCTTCAGTCACATCTTAACCTTGCACTGCTTGATGTGGAGGATGACTCGCTCTCTATGTGTAGTGTTGAACAAAATGTGTCGTTGGAGGACTACTTGAGAGGCAGGTGGAGCCGCTCTTCAAGCTTTGATTGA 2271 0.4271 MKMLQPATAGEARYGGADGRTVVVGVKMDSNSTELLTWALFKVAQPGDVVFALHVLGNDEIVNRDGKSSLFSLVKAFDSVLAVYEGFCNLKQVDLKLKICRGSSVRKILVREAVTYSASHIIVGTPQGLHKIRPCISVARYCAKKLSKDCWVLAVNNGKVVFKRDGSPATRSDLKGLDGDHRNGLLGSIQWKLSKSSKVLDDDGTGLHDKGSGQYSDHSLAKAFMDSKEFIGKKRCSICASTPALFDSPCNHLAEESCGDGCNENSLALVPVKTNDAASRMTTLHGREVTELKPGWPLLHRAILSDRQCSERSLLRQISVVQWVMQFPSRNLSYAANHGLKTNNCDRDKDQFLALDSKSGALVPVDAEIGADSSPEHSSRKVPKELDGFHEKYSSTCRLFKYQELVSATSNFLPENLIGKGGSSQVFRGCLPDGKELAVKILKPSDDVLKEFVLEIEIITTLHHKNIISLLGFCFEDGNLLLVYDFLSRGSLEENLHGKKNPLVFGWAERYKVAMGVAEALEYLHNIEGQSVIHRDVKSSNVLLSEDFEPQLSDFGLAKWASSSSHITCTDVAGTFGYMAPEYFMYGKVNDKIDVYAFGVVLLELLSGRKPISGDYPKGQESLVMWASPIINSGKVSQLLDPSLGNSYDHEEMERMVLAATLCLRRAPRARPQMSLISKLLGGDADVIKWARLEVSALEVPEMLDDEAWPPSNLQSHLNLALLDVEDDSLSMCSVEQNVSLEDYLRGRWSRSSSFD* 757
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g0779 756 SMART serkin_6 412 681 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr9g0779 756 PANTHER ADENINE NUCLEOTIDE ALPHA HYDROLASE-LIKE DOMAIN KINASE 11 750 - -
Apr9g0779 756 Gene3D Transferase(Phosphotransferase) domain 1 487 689 - -
Apr9g0779 756 SUPERFAMILY Protein kinase-like (PK-like) 393 679 IPR011009 -
Apr9g0779 756 ProSitePatterns Protein kinases ATP-binding region signature. 418 440 IPR017441 GO:0005524
Apr9g0779 756 Pfam Protein kinase domain 416 625 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr9g0779 756 ProSitePatterns Serine/Threonine protein kinases active-site signature. 532 544 IPR008271 GO:0004672|GO:0006468
Apr9g0779 756 Gene3D Phosphorylase Kinase; domain 1 375 486 - -
Apr9g0779 756 ProSiteProfiles Protein kinase domain profile. 412 681 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr9g0779 756 PANTHER OS01G0253100 PROTEIN 11 750 IPR045271 GO:0004714|GO:0006468
Apr9g0779 756 Pfam Universal stress protein family 20 152 IPR006016 -
Apr9g0779 756 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 20 152 - -
Apr9g0779 756 Gene3D HUPs 19 157 IPR014729 -
Apr9g0779 756 CDD USP_Like 21 152 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g0779 Apr-Chr9 14285002 14289188 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr9g0779 399 677 Trihelix Transcription Factor Family AT1G68690 47.018 1.36e-75 256
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VI Apr9g0779 Pkinase 2.6e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g0779 - - aprc:113846853 1512.28
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr9g0779 9 14285002 14289188 Apr9g0779 9 14285002 14289188 ECH
Apr9g0779 9 14285002 14289188 Apr1g0427 1 5278255 5281953 PCT