Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g0778 ATGGATCAACACCACTTCCTTCATCACCACCACCACCACCACCAAGAACACCGCACAAGATACACTTCTCTCAACCCTCAATCACACCACCACCACCTCAACCTCCCTCCTCCGCCTCCTCCGCCACCCGCTCCGCCGCCTGCACTGCCACCCCTCTCTTACCGCACCATCCACACCCCTCCCTCTCAACCCTACAACCCTCCTCCACCTCAACCTCAACAATTCCCCTTCAATCCCCCAAATAACTATCCTCACCACCCTCTCGATGAAGAACGCTCTCTCTCCCTCTCCTTTGACCTCCTCCCTCGCCGCAACCAATGGAACCCTAGCCCCAGAACCCTCCCTGAGGACCGCAATTACCCTCCCCTCGATTTTGACCGCGAATTCAACCACCACCGTCCTCCCCCGCCCCCGCCATCGTATCCCACGATCGAAAACCTCCGGTACGATGCTGACGGTGGTGGCGCTAGGCTGAGGACAGAACGCTTCGATCCCTACGAGCAAAACCCTAGGGAGGGGTTCGCGTGGGGCCGAGACGGCAATTACCACCGTGCCGGCGCGCCGATTGCTTCTGCGCCGAGCCAGGGTGAACTGGAACCGAAACCCAGTGGCTACGTTCGAGTCTACAGCATGGAATGTGATGCTGACGTTTCAAGTAGAAGTGGCAGGGTTGAGAGCAAGAGATGGTTGATGAGTGATAGGAAGGGATCAAGAGAGTTGCATGATTCTCCTTCTTCTCCTTCGTTTGAATTGGTGAATGGTAATGAGAAATATTACGGTTCCGAAGTGGGTAGATATAACTTTAGAGGGAACAGTAGAGAGTGTGGTCATGAATTTGCTCGTACTCCTCCGAAGAAACAGGTGCAGAAGAAGAGTGCTCTTCTTAGGATTCAGACGGTTAAACCCAATCATAGGAACCGTGAGATTGAGCAGTTACGATATGCTCCTGAATCTAGCTCTGGATTCTTCAGGGGTAAGGAGCAACATGGGTATTTAGGTCATGGAATGAAGGGAGAAGAAAGAGAGGGAAGTCCTGTTGAGCTTGATATTTCTTTTGAATCAAATTCTTTGGTGGCTAAGGCTATTGTGGCGCCTTCGAGTTCCGCATCTGTTCCTGATTTGAATGTGAATCCTATTTCTGATTCGGATTTGGGTTCTGTGGAAAAGAGTAAAAAGGTTTTGGTCTCTGATAGTGGTGGTTCTGGTTCGCAGCCGTTTAGACTAGCTTCTGCTGTTGTGGATTTAAATAACTCGCCTTGCAAAGCCAATGACACCTCTAGTACAGGCAAGGACTTGAGTGTACAGAAGAATGTCCCTGATGACAGTTCTTCTCGACCTTGTGCTACTGAGACCAATGATTCTTGTGGGAAAAATGCGGTGCTGAATTCAGTTGAAGGTGTCAATGTTTGTCCCAGTAAATCAGCCCCAAGGGTTGTCAGGAAGAAAAAAGTTGTTAAGAGAGTGGTGAAGAAAGCTGCTATAAATCGTAATTCATCTGTGTCAAATTCACGATCAGCAAATACACTTAATGGAACTGTGGATGTTGATAGAGTCACACATAGTTCATCAACGGCCTCTGGTCCTGCGAAAATTGAAACTAATTTGGAGGTGAGAACCACCACTGTTGGAGAGGTGTCTGTGCCAGATTGTTTGCATTCTTTACCAAAGGAAGGAAATGTATTGACTGAAGATAAAGAGGGAGGTTTATCGATGCCGAGTTTGGGGCCAGATTGCAGGTCTCAAGAGTGTAAGAGTGACGAAGATTCTGTTATTGTGACAGTATCCAGGTCTGAAAGAGGTGGACACGCTTCAAATTCTCCATCTTGTGCTTCTAGTAGAAAAGATAAGAAGAGTGACTCTGATTGTTTAGATGCAAATAATTCTGCCCATGACTTTATTAGTGTGCCAAATACTGACACAGTTACTAAATCATTAAATGGAAGTATTATTTCTGAAATCAATCACAAGGATTATGATAATAGGCAATTATGTCAGAGCGAAGTGTCTTCGTCACCTGGGAAATATTCAGATGTAGGATGCCCTAGGAATCTTGTAGATGTAGAGGATGAAATATTCAAAAGCAGTGGAATGGTTATCTTTTCAAGTTCTGGAAAAACTAGGATTCAGGATGGTCTAGATTGCCTACAACATTCCAATGCACTGAGGCAGGGTTCTGATAATGGATCATATAATGTAGAGGATAGTATGGGAGTTCACCATTTTGGTATCATGAATGATGCTGAAAAGCAGGTGTCCCGTGGTGATGTCACCATATCCACTGAGAATTGTGGCACAGAAAAAACATTCCCAAATTCTAATATTTCAGTTGGATATGGTGAAGGGGATACAAATGAGATAAAAAAGAGAAAAGTTAGGACTCATTTAAATGTTTCGAGTTCAAAGAGGGATTGCATATCTCCAGACCATGTAAATCCAGTTAGCCTTGAAAATAATGTTGATAGAGGCTCAAGTCTGTTGTTGAAGGATCAATGTCCTTCAGAAGTTTTAGATCAATCTGTTCAAAGCTTAGATTTTAGCCCACCATCCAGCCTGGATGGGGTCACTGCTTTACATGGGAAAAAGGGGGTTTTAGAGGTTAAGTTTTATGTTGGAAATAATGACAATGAAACAAATGAGGTTTCTCCAGTTTCTAAAAGGAAAAAAGTTGCAAATAGTGACCCAAATTTCACCCAATGTGAGTTGGAATTCAGTAATGTGATTATGGCTACCACATCTAGTGCAGGAATTCCTATCAGTTTCAGAGATAACCAAGAACCTCAGGAAGAAAAGGTTGCTTTGTCAAGCATAGATGTTCTATCTACAGCTCAGTCAATACCTAATTCAGAGGATATTACTAAATTGTCTGACAATATTTTGGCTGAAGGATCTTTTGAATCTATTGATGGAAATATGGAAACCATGAGTTCTGAACATTTGAAATTGCAGCACTCAGATATTGTGTCTTATTTACCTTGTGAGGACTTGGCTGTTCCAAATGTTCAGTTCTCATTGTTGGAAACTCAGCACAAAGAAAACATTACTCCGTTTGTGCCTATAGGTAATACTCAAACTGACATTTTGGCTATTGGAAATATCATGGGAGAAAAGACTGATTTACCAGCTGTTGAAGAAAACTACCAGTATGGAGAACTTGTGCAAAGGTCTCCAAGGGATAATATGGAATCTAATGATCTCAATATGAAGGATGATTTACTTGCTCAGCAGAACCTTATGCCCAGTCCAGCTGATGGTGATGGAATCACTATAAGTAATTCAAATGATGAATTGATTGAGGATGCACCTGATGCATTTTCAGATATGTATTCTCAAAGTATGACATCTGAAGTACCAGATAGAAAGGTTTTAGAGTATACAGCAATCCATGATGAAAGTATTTGTGGAGATGAAGAAAATCCAGATAGCATATCTGTGGTTGAACTTGGTTCTGACTTAAATACTTTTACTTCATCAGTGCAGCAGACTAAAACAATTATGAAGTCAAATCATGCAATTGGACATAATAACTTGATTGTGGGGAAGATAATGTCAGAACCATCCCAAGTTTTTTCCAAAGTTACATCTTGGGGTCTAAATTCATATAATTCTGAATCAAGTGGGACAAAAAATCAAGCAGGTGTTGTCATTCTCAAAAGTTTTCCAAATCATTCTTTCACCTTTTCAAAGTCAAAGACAAAGACATCTGCCTCTTCAGCACATGTATCAAAACCACGAACTTGGCATCGTACAGGTAATAATCCTCCTGCTTCTCTACCTAGAAGCAAGCCTCCAGTAGGAAAAGTTCCTCCCAAAAGGTCAATTCTAGAACGGAAAGGGAACTTTCAAAATACCTCCTACATTCGTAAAGGGAACAGTCTTGTAAGGAAACCTACTCCATTTTCTGCTTTACCTCAAATCTCCTCTGTTAATCAGTCATCTTCTTTGGGCTTAGACGAAATACCCAAGAGCACCAGATTTGAAAGCAGGGCTGATGTGACTGAACAGCCAATGTACTTGAGAACAGGAGCAACAAATGCTCCTCAGCAGAGGCAGAGAACACCTCCGCTACCAATTGACACCAAATCAGAGGAAAATATATCTTCCGCTTTGTTAGAACCTCCTTCCAGTGGTTGTTGTGAAAATGCATCAGATCCTAGGAAAGTTACAGAAACTAATGATGCTTCAAACTCTTCTGAAGATGCAATGAAGCATTATGAGACTCCTGAAAATCAAACTGGTCCATCTAATAATGGGGAGAGCCAAGTTGAAGCAAATGATGGGAATATTGTTTCTTTGAATACAAAGAGAATAGTATATATAAAGCCCAAAACAAATCAATTGGTTGCAACTTCAAATTCTTGTGATATCTCTCTCTCTACTGATGTCAAGGGCCAAATAGCCTTCTCCGATGGCTACTACAAGAGAAGCAAAAATCAATTGGTAAGGACTGCATTTGAAAGTCATATCAACCAGACAGTTGTAATGCCCAATAGCACTGTAAATTCTGACGGCCATGGGGCTCTTAAGGTTCTTTGCAACAGGAGGTTTAGTAAGAGGCGTTCTAATAAGGTTACTAGGAGTTCATGCAAACCTTCAAGAGCATCATTAGTGTGGACACCTCGTAGCAAAAATTCATCCAAAAATGTCAGGGACGCATGGCATTATCAAAGGGTTATACCTCAGTTGTTTCCATGGAAAAGAACAACCTTTTTAAGAAGTTTCATTCATAATTCTGCTTCAAGCTTCAATAGTAGTTCCTTATCTGCAATCAGCAAGAAATTGCTTCTGTTGAGAAAGAGGGATACTGTTTACACCCGGTCAACCCATGGGTTTTCTCTTTGGAAATCCAAAGTATTAGGTGTTGGTGGGTCTAGTTTAAAATGGTCCAAATCCATTGAGAAGAACTCAAAACAAGCTAATGAGGAAGCCACGCTTGCTGTTGCTGCAGTAGAGAGGAAGAAAAGAGAGCAGAAAGATGTGGTTTGCATTAGTTCTCAATCAAAGAGAGAACGTATATTTCGTATTGGTTCAGTTCGGTACAGAATGGATCCTTCTAGGCGGACACTTCAGAGGATTTCAGATGATGAATCCCAGTCCTCTGCCTCCTCCTCTTCAGGTTTGGCTGCCAAAAGAGCTTACATTCCAAAGAGATTAGTAATTGGAAATGATGAATATGTCCGTATTGGCAACGGGAACCAGCTTATCAGGGATCCAAAGAAACGAACAAGAAAATTGGCAAATGAAAAAGTTAGATGGAGCTTGCACACTGCCAGACAGCGGTTGGCTCGAAAACAGAAATATTGTCAGTTTTTTACTAGATTTGGGAAATGTAACAAGGATGGAGGGAAGTGTCCTTATATTCATGATCCCTCAAAAATCGCTGTCTGTACTAAGTTCCTGAATGGTTTATGTTCTACTCCCAACTGCAAATTGACTCATAAGGTTATTCCAGAGAGAATGCCAGACTGTTCTTATTTTTTGCAAGGCTTGTGCTCAAACAGAAACTGTCCATATAGACATGTCAATGTGAACCCGAAGGCATCTATTTGTGAAGGATTTCTTAAAGGTTATTGTGCTGATGGAAACGAGTGTCGGAAGAAGCACAGCTATGTCTGTCCTTCTTTTGAAGCAACAGGAACCTGTACTCAAGGAACCAAATGCAAGCTTCATCACCCCAAAAAACAAAACAAGGGAAAGAAAAGAAAGAGATCTGGTGATCAGAACAGTAGAGGGCGTTATTTTGGTTCTATTTCCATTGATGTTTCTGAACCTGGGATGATGATGGCTTCAAAGCAATGTCAACAAAATGATGAGGAACTTTCAGACTACATCAGCCTTGATGTGAATGAAGAAGTTGCGAACACAGTGGATCAATCATTTGATCCTGCAACATTGAGTAACGATGATTCATTGGATTTAAATTTGGATGATTTTGATGAATTTATTAAACCTGTTCTTATAATGATAAATACAAAAATCTCATCGCAATCATCCCAGTCTAGTAGCCTGGAAGTGGCGGAGGCTGAAGGTAGTTTATCAATGAGGTAA 6045 0.4174 MDQHHFLHHHHHHHQEHRTRYTSLNPQSHHHHLNLPPPPPPPPAPPPALPPLSYRTIHTPPSQPYNPPPPQPQQFPFNPPNNYPHHPLDEERSLSLSFDLLPRRNQWNPSPRTLPEDRNYPPLDFDREFNHHRPPPPPPSYPTIENLRYDADGGGARLRTERFDPYEQNPREGFAWGRDGNYHRAGAPIASAPSQGELEPKPSGYVRVYSMECDADVSSRSGRVESKRWLMSDRKGSRELHDSPSSPSFELVNGNEKYYGSEVGRYNFRGNSRECGHEFARTPPKKQVQKKSALLRIQTVKPNHRNREIEQLRYAPESSSGFFRGKEQHGYLGHGMKGEEREGSPVELDISFESNSLVAKAIVAPSSSASVPDLNVNPISDSDLGSVEKSKKVLVSDSGGSGSQPFRLASAVVDLNNSPCKANDTSSTGKDLSVQKNVPDDSSSRPCATETNDSCGKNAVLNSVEGVNVCPSKSAPRVVRKKKVVKRVVKKAAINRNSSVSNSRSANTLNGTVDVDRVTHSSSTASGPAKIETNLEVRTTTVGEVSVPDCLHSLPKEGNVLTEDKEGGLSMPSLGPDCRSQECKSDEDSVIVTVSRSERGGHASNSPSCASSRKDKKSDSDCLDANNSAHDFISVPNTDTVTKSLNGSIISEINHKDYDNRQLCQSEVSSSPGKYSDVGCPRNLVDVEDEIFKSSGMVIFSSSGKTRIQDGLDCLQHSNALRQGSDNGSYNVEDSMGVHHFGIMNDAEKQVSRGDVTISTENCGTEKTFPNSNISVGYGEGDTNEIKKRKVRTHLNVSSSKRDCISPDHVNPVSLENNVDRGSSLLLKDQCPSEVLDQSVQSLDFSPPSSLDGVTALHGKKGVLEVKFYVGNNDNETNEVSPVSKRKKVANSDPNFTQCELEFSNVIMATTSSAGIPISFRDNQEPQEEKVALSSIDVLSTAQSIPNSEDITKLSDNILAEGSFESIDGNMETMSSEHLKLQHSDIVSYLPCEDLAVPNVQFSLLETQHKENITPFVPIGNTQTDILAIGNIMGEKTDLPAVEENYQYGELVQRSPRDNMESNDLNMKDDLLAQQNLMPSPADGDGITISNSNDELIEDAPDAFSDMYSQSMTSEVPDRKVLEYTAIHDESICGDEENPDSISVVELGSDLNTFTSSVQQTKTIMKSNHAIGHNNLIVGKIMSEPSQVFSKVTSWGLNSYNSESSGTKNQAGVVILKSFPNHSFTFSKSKTKTSASSAHVSKPRTWHRTGNNPPASLPRSKPPVGKVPPKRSILERKGNFQNTSYIRKGNSLVRKPTPFSALPQISSVNQSSSLGLDEIPKSTRFESRADVTEQPMYLRTGATNAPQQRQRTPPLPIDTKSEENISSALLEPPSSGCCENASDPRKVTETNDASNSSEDAMKHYETPENQTGPSNNGESQVEANDGNIVSLNTKRIVYIKPKTNQLVATSNSCDISLSTDVKGQIAFSDGYYKRSKNQLVRTAFESHINQTVVMPNSTVNSDGHGALKVLCNRRFSKRRSNKVTRSSCKPSRASLVWTPRSKNSSKNVRDAWHYQRVIPQLFPWKRTTFLRSFIHNSASSFNSSSLSAISKKLLLLRKRDTVYTRSTHGFSLWKSKVLGVGGSSLKWSKSIEKNSKQANEEATLAVAAVERKKREQKDVVCISSQSKRERIFRIGSVRYRMDPSRRTLQRISDDESQSSASSSSGLAAKRAYIPKRLVIGNDEYVRIGNGNQLIRDPKKRTRKLANEKVRWSLHTARQRLARKQKYCQFFTRFGKCNKDGGKCPYIHDPSKIAVCTKFLNGLCSTPNCKLTHKVIPERMPDCSYFLQGLCSNRNCPYRHVNVNPKASICEGFLKGYCADGNECRKKHSYVCPSFEATGTCTQGTKCKLHHPKKQNKGKKRKRSGDQNSRGRYFGSISIDVSEPGMMMASKQCQQNDEELSDYISLDVNEEVANTVDQSFDPATLSNDDSLDLNLDDFDEFIKPVLIMINTKISSQSSQSSSLEVAEAEGSLSMR* 2015
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g0778 2014 MobiDBLite consensus disorder prediction 1 89 - -
Apr9g0778 2014 MobiDBLite consensus disorder prediction 1227 1293 - -
Apr9g0778 2014 Gene3D - 1788 1842 - -
Apr9g0778 2014 MobiDBLite consensus disorder prediction 1313 1426 - -
Apr9g0778 2014 PANTHER CCCH ZINGC FINGER 336 1987 - -
Apr9g0778 2014 Gene3D - 1843 1907 - -
Apr9g0778 2014 ProSiteProfiles Zinc finger C3H1-type profile. 1871 1893 IPR000571 GO:0046872
Apr9g0778 2014 MobiDBLite consensus disorder prediction 1337 1373 - -
Apr9g0778 2014 MobiDBLite consensus disorder prediction 1 18 - -
Apr9g0778 2014 MobiDBLite consensus disorder prediction 1886 1905 - -
Apr9g0778 2014 ProSiteProfiles Zinc finger C3H1-type profile. 1761 1790 IPR000571 GO:0046872
Apr9g0778 2014 MobiDBLite consensus disorder prediction 417 455 - -
Apr9g0778 2014 MobiDBLite consensus disorder prediction 61 83 - -
Apr9g0778 2014 MobiDBLite consensus disorder prediction 368 384 - -
Apr9g0778 2014 MobiDBLite consensus disorder prediction 32 54 - -
Apr9g0778 2014 ProSiteProfiles Zinc finger C3H1-type profile. 1843 1870 IPR000571 GO:0046872
Apr9g0778 2014 MobiDBLite consensus disorder prediction 558 621 - -
Apr9g0778 2014 MobiDBLite consensus disorder prediction 1884 1913 - -
Apr9g0778 2014 MobiDBLite consensus disorder prediction 1407 1426 - -
Apr9g0778 2014 MobiDBLite consensus disorder prediction 1276 1290 - -
Apr9g0778 2014 MobiDBLite consensus disorder prediction 1227 1255 - -
Apr9g0778 2014 MobiDBLite consensus disorder prediction 368 387 - -
Apr9g0778 2014 SMART c3hfinal6 1761 1789 IPR000571 GO:0046872
Apr9g0778 2014 SMART c3hfinal6 1843 1869 IPR000571 GO:0046872
Apr9g0778 2014 SMART c3hfinal6 1790 1814 IPR000571 GO:0046872
Apr9g0778 2014 SMART c3hfinal6 1870 1892 IPR000571 GO:0046872
Apr9g0778 2014 SMART c3hfinal6 1816 1841 IPR000571 GO:0046872
Apr9g0778 2014 ProSiteProfiles Zinc finger C3H1-type profile. 1816 1842 IPR000571 GO:0046872
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Apr9g0778 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g0778 - - gmx:100788859 2370.89
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr9g0778 9 14260776 14272364 Apr9g0778 9 14260776 14272364 ECH