Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g0763 ATGGGTCTTTCGAATGTTTCTGTCCTGAAGGACAAGTTGGAAATGGAACGAGAGAAGGTGGAGGATGCCAACCAAAGCTGCGAGATGATATATTTACCAAGCACACTTACTTATGGGGTAGGTGCAGGATTAATGGCTTTACTTATGGGGACTTCCTGGTTATACCTGATATACCAAAAAAGGAAACTCATCAAATTAAAGGAGAGGTTCTTTCGGCAAAATGGTGGTATCATTCTGAAACAACAACTCTCAGTAAGAGAAGACTCGTCCCAGTGTACTACGATTTTCACATCCGAGCAACTTAAGAAAGCCACCAACAATTACAACGAAAGCATGATTACCGGTTCAGGAGGTTATGGTACAGTTTTCAAAGGTTTTCTTTCAAATCATAGGATTGTTGCTGTCAAGAAATCTAAAGTAATGGATCAGAGCCAAATTGAACAATTCATTAATGAGGTGGTTGTGCTATCACAAATTAATCATAGAAATGTGGTCAAACTCTTGGGTTGTTGTTTAGAGACAGAAGTTCCTTTATTGGTCTATGAATTTGTTAACAATGGTACCCTTTTTGGTTACTTACACAAAGGCAAGGAAACAACTAATATATCTTGGAAAACTCGTTTAAGGATAGCAGCAGAGGCAGCGGGAGCATTAGCATATTTGCATTCAGCAGCTTCAATACCCATCATCCATAGAGATGTCAAGACTGCCAACATCCTCTTAGATCACACTTACACTGCCAAAGTGTCTGATTTTGGAGCTTCAAGATTGGTTCCACTTGACCATACTGAAATAGCCACAATTGTGCAAGGAACTTTTGGCTACTTAGACCCAGAGTATATGCAAACTAGCCAATTGACTGAGAAAAGTGATGTTTATAGCTTCGGGGTAGTGCTTGTAGAATTGCTTACTGGGGAGAAGCCTTTTTCTTTTGATAAGGCAGAAGAGAAAAGAAGTCTTGCTGTGCACTTTCTATCTTGCTTGAAAGAGGATCGCTTGTTTGAAGTTATTCAAGTTGACTTTTTGAATATAGAAAATAAAGAACAGGTCATAGAGGTTGCTATTCTTGCTTCCAGGTGCTTGAGACTTAGAGGGGATGAAAGACCTAGCATGAAGGAAGTGGCAATGGAGTTAGATAGAATAAAACTCGTGGAAGAGCACACATGGACCAATACAAACCAAGAGCATGAGGAGACCCAATACTTACTTCATGAGGCACATAGCATTCGTGGACATGGTGATAGTAGTGACCATCAAAATACTGGATATGACAGCTTGAGAGATCATGTATTGATTGCCATGGATAATGGAAGATGA 1317 0.3979 MGLSNVSVLKDKLEMEREKVEDANQSCEMIYLPSTLTYGVGAGLMALLMGTSWLYLIYQKRKLIKLKERFFRQNGGIILKQQLSVREDSSQCTTIFTSEQLKKATNNYNESMITGSGGYGTVFKGFLSNHRIVAVKKSKVMDQSQIEQFINEVVVLSQINHRNVVKLLGCCLETEVPLLVYEFVNNGTLFGYLHKGKETTNISWKTRLRIAAEAAGALAYLHSAASIPIIHRDVKTANILLDHTYTAKVSDFGASRLVPLDHTEIATIVQGTFGYLDPEYMQTSQLTEKSDVYSFGVVLVELLTGEKPFSFDKAEEKRSLAVHFLSCLKEDRLFEVIQVDFLNIENKEQVIEVAILASRCLRLRGDERPSMKEVAMELDRIKLVEEHTWTNTNQEHEETQYLLHEAHSIRGHGDSSDHQNTGYDSLRDHVLIAMDNGR* 439
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g0763 438 Pfam Protein kinase domain 108 374 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr9g0763 438 Gene3D Phosphorylase Kinase; domain 1 76 183 - -
Apr9g0763 438 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 9 29 404 - -
Apr9g0763 438 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 29 404 IPR045274 GO:0007166
Apr9g0763 438 Gene3D Transferase(Phosphotransferase) domain 1 184 407 - -
Apr9g0763 438 SUPERFAMILY Protein kinase-like (PK-like) 88 378 IPR011009 -
Apr9g0763 438 SMART serkin_6 108 381 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr9g0763 438 ProSiteProfiles Protein kinase domain profile. 108 390 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr9g0763 438 Coils Coil 3 30 - -
Apr9g0763 438 ProSitePatterns Serine/Threonine protein kinases active-site signature. 229 241 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g0763 Apr-Chr9 13814640 13816030 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr9g0763 34 438 Receptor kinase-like Gene Family AT1G21230 52.217 5.07e-140 416
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK Apr9g0763 Pkinase 5.4e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g0763 - - ccaj:109807269 623.624
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr9g0763 9 13814640 13816030 Apr9g0763 9 13814640 13816030 ECH
Apr1g0755 1 9004992 9008992 Apr9g0763 9 13814640 13816030 PCT