Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g0754 ATGCAGATGCAACTGACCCTGCTGTTGGTGACTGCTTTAGCAACGGTAGGAGCTGCCCCACCTGACCTAGCCTTGCCCGGCTGCCCGAGCAAATGCGGAAATGTTTCAATTCCATACCCATTTGGCATAGGCAATTCAAAGACGGGTCGCAGGTGTTTCTTGGAGGCAAAAATGAACTTCACTTGCAACCAGAATGATTTAGTGTACGGTAATGTCCCAATTGTGAACATAACCCTAAAGGGTAAAATGGAAATGCTAACCTACATCTCCCAGGTTAGGAAAACGAGGTCAGATGAAAAAGTAACAGAAAGTACCTGGTCCACAGTTAGTTTACCAGACTATCCCATTTCCAGCGATGATAACAAATTCATAAGTGTAGGGTGCGACACTTACGGCTATCTCCGGAATTTTCATGAAGGTGAGATATCTTCAACGGGTTGCTTAAGTATATGTAATAGCACAAAGGATGTGCCGGCTGATGGAAACTGCACGGGGGTGGGGTGTTGCCAGGTTGATATTCCTCGAGGAATGAAGAATATTAGCGTGCGAGCGTATACCTTTGACAATTTCAGTGACACGTGGGAGTTTAATAACTGTAGCTTATCCTTTGTTGTCAAAAAAGAAAACTACAGCTTTTCTGTGGATCATTTGAAAAGTGTCCCGTTCGAGATGGCTCCGTTAATTGTTGATTGGAATGTTGGACATGATACATGTGAAAATGCAAAGCTTAAAGATGACTATGCGTGTAAAAAGAATAGCCATTGCGAAGACTCGGCCACTAGATCTGGTTACCTTTGCCAATGTAACAAAGGTTTTCAGGGAAACCCGTACCTTAATGGTTGTCAAGATATTGAGGAATGTAAGACTGATGATCAACACAATTGCGTAAGTAAAGATAATTGTCGTGAAAAACAAGGGTCTTTCGAATGTTTCTGTCCTGAGGGACAAATCGGGAATGGAACGAGAGAAAGTGGAGGATGCCGACAAAAGCAGCGAGATGATAAATTTACCAAGGTTGCCACTGGTGTAGGTGCAGGATTAATGGCTTTACTTTTTGGGAGTTCTTGGTTATACCTGATATACCAAAAAAGAAAACTCATCAGATTAAAGGAGAGGTTCTTTCGGCAAAATGGTGGTATCATTCTGAAACAACAACTCTCAGTAATAGAAGACTCGTCCCAGTCTACTATGATTTTCACATCAGAGCAACTTAAGAAAGCCACCAACAATTATGACGAAAGCATGATCATCGGTTCAGGAGGTTATGGTACAGTTTTCAAAGGTTTTCTTTCAGATCATAGGATTGTTGCTGTCAAGAAATCCAAAGTAGGGGATCAGAGCCAAATTGAGCAATTCATTAATGAGGTGGTTGTGCTATCACAAATTAATCATAGAAATGTGGTCAAACTCTTGGGTTGTTGTTTAGAGACAGAAGTTCCTTTATTGGTCTATGAATTTGTTAACAATGGTACCCTTTTTGATTACTTACACAAAGGCAAGGAAACAACTAATGTATCTTGGAAAACTCGTTTAAGGATAGCAGCAGAGGCAGCGGGAGCATTATCATATTTGCATTCAGCAGCCTCAATACCCATCATCCATAGAGATGTCAAAACTGCCAACATCCTCTTAGATGACACTTACACTGCCAAAGTGTCTGATTTTGGAGCTTCAAGATTGGTTCCACTTGACCATACTGAAATAGCCACAATTGTGCAAGGAACTTTTGGCTACTTAGACCCAGAGTATATGCAAACTAGCCAATTGACTGAGAAAAGTGATGTTTATAGCTTCGGGGTAGTGCTTGTAGAATTGCTTACTGGGGAGAAGCCTTTTTCTTTTGATAAGACAGAAGAGAAAAGAAGTCTTGCTGTGCACTTTCTATCTTGCTTGAAAGAGGATCGCTTGCTTGAAGTTATTCAAGTTGACATTTTGAATATAGAAAATAAAGAACAGGTCATGGAGGTTGCTATTCTTGCTTCCAGGTGCTTGAGACTTAGAGGGGATGAAAGACCTGGCATGAAGGAAGTGGCAAGGGAGTTAGATAGAATAAAACTCGTGGAAGAGCACCCATGGACCAACACAAACCAAGAGCATGAGGAGATCCAATACTTACTTCACGAGGCACATAGCATTCGTGAACATGGTGATAGTAGTGACCAACAAAATACTGGATATGACAGCTTGAGAGATCATGTATTGATTGCCATGGATGATGGAAGATGA 2226 0.4133 MQMQLTLLLVTALATVGAAPPDLALPGCPSKCGNVSIPYPFGIGNSKTGRRCFLEAKMNFTCNQNDLVYGNVPIVNITLKGKMEMLTYISQVRKTRSDEKVTESTWSTVSLPDYPISSDDNKFISVGCDTYGYLRNFHEGEISSTGCLSICNSTKDVPADGNCTGVGCCQVDIPRGMKNISVRAYTFDNFSDTWEFNNCSLSFVVKKENYSFSVDHLKSVPFEMAPLIVDWNVGHDTCENAKLKDDYACKKNSHCEDSATRSGYLCQCNKGFQGNPYLNGCQDIEECKTDDQHNCVSKDNCREKQGSFECFCPEGQIGNGTRESGGCRQKQRDDKFTKVATGVGAGLMALLFGSSWLYLIYQKRKLIRLKERFFRQNGGIILKQQLSVIEDSSQSTMIFTSEQLKKATNNYDESMIIGSGGYGTVFKGFLSDHRIVAVKKSKVGDQSQIEQFINEVVVLSQINHRNVVKLLGCCLETEVPLLVYEFVNNGTLFDYLHKGKETTNVSWKTRLRIAAEAAGALSYLHSAASIPIIHRDVKTANILLDDTYTAKVSDFGASRLVPLDHTEIATIVQGTFGYLDPEYMQTSQLTEKSDVYSFGVVLVELLTGEKPFSFDKTEEKRSLAVHFLSCLKEDRLLEVIQVDILNIENKEQVMEVAILASRCLRLRGDERPGMKEVARELDRIKLVEEHPWTNTNQEHEEIQYLLHEAHSIREHGDSSDQQNTGYDSLRDHVLIAMDDGR* 742
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g0754 741 Gene3D Laminin 234 325 - -
Apr9g0754 741 PANTHER WALL-ASSOCIATED RECEPTOR KINASE 2-LIKE ISOFORM X2 16 708 - -
Apr9g0754 741 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 16 708 IPR045274 GO:0007166
Apr9g0754 741 SMART serkin_6 411 693 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr9g0754 741 Gene3D Phosphorylase Kinase; domain 1 378 486 - -
Apr9g0754 741 Gene3D Transferase(Phosphotransferase) domain 1 487 710 - -
Apr9g0754 741 ProSitePatterns Serine/Threonine protein kinases active-site signature. 532 544 IPR008271 GO:0004672|GO:0006468
Apr9g0754 741 ProSiteProfiles Protein kinase domain profile. 411 693 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr9g0754 741 SMART egf_5 286 328 IPR000742 -
Apr9g0754 741 SMART egf_5 237 282 IPR000742 -
Apr9g0754 741 SUPERFAMILY Protein kinase-like (PK-like) 390 681 IPR011009 -
Apr9g0754 741 Pfam Wall-associated receptor kinase galacturonan-binding 28 84 IPR025287 GO:0030247
Apr9g0754 741 Pfam Protein kinase domain 411 678 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr9g0754 741 ProSitePatterns Protein kinases ATP-binding region signature. 417 440 IPR017441 GO:0005524
Apr9g0754 741 CDD STKc_IRAK 417 684 - -
Apr9g0754 741 ProSitePatterns EGF-like domain signature 2. 266 281 IPR000742 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g0754 Apr-Chr9 13476684 13480211 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr9g0754 16 741 Receptor kinase-like Gene Family AT1G21230 44.369 0.0 581
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK Apr9g0754 Pkinase 5.8e-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g0754 - - gmx:100819535 1027.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr9g0754 9 13476684 13480211 Apr9g0754 9 13476684 13480211 ECH
Apr9g0754 9 13476684 13480211 Apr1g0563 1 6878845 6883189 PCT