Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g0750 ATGACTAAAAATAAGAGTTTTAAATATCTTACAGGCATAAGTATTAAAGAAGGATATAAAGATCCCATTAGTTCTCAAATTTTCCAGAAACAAAACAAATATGGGTTTCTACCAAATTCTTCAGATGCTCCAATTCTTTGTGCTGGTTGTGGGACACCAGCAGAATTATATACCACGGAATTAGTGAGGTTCAACTATTTTGATATACAGCTTGCAACAGATGACTTCTCAAAGAATAACTTATTAGGTGAAGGTGGATATGGTCGTGTATACAAGGGCATGCTTAAAGATGGGCAACAAATAGCTGCTAAGGTAAGGAGAGAAGAAAGTAAACAAGGCTTTTCTGAATTTAGTTCTGAGGTTTACGTGTTGAGTCTTGCTCGTCACAAGAATATAGTGATGCTTTTGGGATTCTGCTTCAAAGAAAGGTTAAATATTCTGGTATATGAATATATTTGCAACAAGTCTCTTGAATGGCATCTATTCGATAAAAAAGCCGAAGTTCTCGAGTGGCACCAAAGATACGCCATTGCCATTGGAACTGCGAAAGGATTGCGTTTTCTACACGAAGAATGTCGTGGAGGTCCTATCATTCATCGAGACATGAGACCTAGCAATATACTACTCACTCATGATTTTGTTCCAATGCTAGGTGACTTTGGCCTTGCCAAATGGAAGACTAGTGATAAGACACTGCAAACAAGGATAATGGGCACATTAGGATACCTTGCCCCTGAATATGCTGAGGACGGTATATTTTCTGTGCAAATAGATGTGTATGCTTATGGGATTGTTCTTTTACAATTGATAACAGGACGCAAGGCCATTTCTAGTCCAGAGCAACATCTCTCCCTTCGACAATGGGCAGAGCCCAAAATTGAGAAGTTAGCATTTCATGAACTTGTAGATTCCCGTTTGGGGGAGTCATATAACTCAGATGAGCTATACGTAATGGCCAAGGTAGCATACCATTGCGTGCAAAGAGATCATGAGAAGCGACCGTCGATTGGAGAGGTTGTACGCCTTCTTGAGAGACAGAATGACTATTTCAGTTTCATTGGAGAACAATCAGTATCAAAATATATTACATGA 1092 0.391 MTKNKSFKYLTGISIKEGYKDPISSQIFQKQNKYGFLPNSSDAPILCAGCGTPAELYTTELVRFNYFDIQLATDDFSKNNLLGEGGYGRVYKGMLKDGQQIAAKVRREESKQGFSEFSSEVYVLSLARHKNIVMLLGFCFKERLNILVYEYICNKSLEWHLFDKKAEVLEWHQRYAIAIGTAKGLRFLHEECRGGPIIHRDMRPSNILLTHDFVPMLGDFGLAKWKTSDKTLQTRIMGTLGYLAPEYAEDGIFSVQIDVYAYGIVLLQLITGRKAISSPEQHLSLRQWAEPKIEKLAFHELVDSRLGESYNSDELYVMAKVAYHCVQRDHEKRPSIGEVVRLLERQNDYFSFIGEQSVSKYIT* 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g0750 363 PANTHER RECEPTOR-LIKE KINASE 33 355 - -
Apr9g0750 363 Pfam Protein kinase domain 77 340 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr9g0750 363 CDD STKc_IRAK 82 345 - -
Apr9g0750 363 ProSiteProfiles Protein kinase domain profile. 76 350 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr9g0750 363 Gene3D Transferase(Phosphotransferase) domain 1 153 356 - -
Apr9g0750 363 PANTHER OS01G0253100 PROTEIN 33 355 IPR045271 GO:0004714|GO:0006468
Apr9g0750 363 ProSitePatterns Protein kinases ATP-binding region signature. 82 104 IPR017441 GO:0005524
Apr9g0750 363 SUPERFAMILY Protein kinase-like (PK-like) 57 347 IPR011009 -
Apr9g0750 363 ProSitePatterns Tyrosine protein kinases specific active-site signature. 197 209 IPR008266 GO:0004672|GO:0006468
Apr9g0750 363 Gene3D Phosphorylase Kinase; domain 1 49 151 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g0750 Apr-Chr9 13358605 13369611 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr9g0750 5 348 Trihelix Transcription Factor Family AT1G70460 41.477 1.38e-81 261
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-2 Apr9g0750 Pkinase 2.9e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g0750 - - aprc:113874259 736.873
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr9g0750 9 13358605 13369611 Apr9g0750 9 13358605 13369611 ECH