Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g0741 ATGTCATTGGTTATATCTACGGAGCTGAGTGATACAACATATAGGAATGCCAAGCTCTACTCGCTAAAGGGAACCAATGTTACACCTGACTTGTCCTCCCACAATTTTGCTCCTGATAAGCACAGAAACATGTACATGACAGACTCTTACTCCAGTGAAAGCTATGAAAAGTACTTCCTTGATTCACCTACTGAAGAACTAATAGAATCATCTAGTTCCAGCATATCTGGAAATTCAATTCACCCTGATGGTGCTTCTTCTTACCCGCTCAGAGTTAGCTCGGGAACTTCTATGATTACTAATAACCCGTTTGATACTTCTTTCTTGTCTACAAGGCATCGCAATGCTTATCAGTCCAACTTCAGTTCAGATTTCTTGGAAAATGGGAGCCCAGATTGCCTTGATTTTGATGGTGAAATGCGATTGAAACTACAAGAATTGGAGAGGGCTTTGCTTTCTGATAATAATGATGAAGAAGAGGAGGAAGATATATTTGAGACTGTTCAAAGCATGGAGATTGATCCTGACATGGCTGAGTGGGTCAATCCCATTCAAGATATGCTGCTTCATGACTCACCAAAGGAGTCTTCATCTTCAGATTCTTCCAATATTAGTAGCATTAGTAGCACCAAAGAAATATCACAAAACTCGCTACGGACCCCAAAGAAAATGCTTTATGACTGTGCTTTAGCTCTTTCAGAAGGAAATAAAGACAGAGCCTCATTTATGATAAATGATCTTCGACAAATGGTCTCAATTCAGGGTGATCCTTCTCAAAGAATTGCAGCTTATATGGTGGAAGGACTTGCAGCTCGTGTGGCTTCATCCGGAAAATGTATCTATAAAGCTTTGAGATGCAAGGAACCTCCTTCTTCGGATCGCTTAGCAGCTATGCAGATACTATTTGAGGTGTGCCCTTGTTTTAAATTTGGATTCATTGCTGCAAATGGCGCAATTGCTGAGGCGGTTAGAGATGAAAAGAAGGTTCACATAATAGATTTTGACATCAATCAAGGAAGTCAATACATAACTCTAATACAAACACTTGCTTCAATGCCAGGTAAGCCACCTCATGTGAGATTAACTGGGGTTGATGATCCTGAGTCAGTGCAGCGATCCGTTGGTGGCCTAAATATCATTGGACAAAGACTTGAAAAGCTGGCAGAAGCACTTGGATTGCCATTTGAGTTTCGAGCAGTGGCATCAAGGACCTCAATTGTCACTCCATCAATGCTCAATTGTCGTCCCGGGGAAGCACTTGTGGTGAACTTTGCATTCCAGCTTCATCACATGCGAGATGAAAGTGTATCAACTGTCAACGAACGAGACCAGCTTCTTCGCATGGTTAAGAGCCTGAATCCAAAACTTGTAACGGTTGTGGAACAAGACATGAACACAAACACCTCGCCTTTTCTCCAGAGATTTGTTGAAACCTACAGTTACTACTCTTATGTGTTTGACTCACTTGATGCAACTCTCCCTAGGGAGAGCCAGGACAGGATGAATGTAGAAAGGCAATGCTTGGCAAAGGACATTGTCAACATTGTTGCGTGTGAGGGCGAGGATAGAATAGAACGGTATGAAGTTGCAGGAAAATGGAGGGCAAGGTTGACAATGGCTGGTTTCACTTCATCACCAATGAGCACAAATGTTAGAGAAGCAATTAGGAAACTCATTAAGCAGTATTGTGACAGGTTCAAGATGAAGGAGGAAATGGGGGGTCTTCATTTTGGGTGGGATGACAAAAACTTAATTGTGGCTTCAGCATGGAAGTGA 1776 0.4206 MSLVISTELSDTTYRNAKLYSLKGTNVTPDLSSHNFAPDKHRNMYMTDSYSSESYEKYFLDSPTEELIESSSSSISGNSIHPDGASSYPLRVSSGTSMITNNPFDTSFLSTRHRNAYQSNFSSDFLENGSPDCLDFDGEMRLKLQELERALLSDNNDEEEEEDIFETVQSMEIDPDMAEWVNPIQDMLLHDSPKESSSSDSSNISSISSTKEISQNSLRTPKKMLYDCALALSEGNKDRASFMINDLRQMVSIQGDPSQRIAAYMVEGLAARVASSGKCIYKALRCKEPPSSDRLAAMQILFEVCPCFKFGFIAANGAIAEAVRDEKKVHIIDFDINQGSQYITLIQTLASMPGKPPHVRLTGVDDPESVQRSVGGLNIIGQRLEKLAEALGLPFEFRAVASRTSIVTPSMLNCRPGEALVVNFAFQLHHMRDESVSTVNERDQLLRMVKSLNPKLVTVVEQDMNTNTSPFLQRFVETYSYYSYVFDSLDATLPRESQDRMNVERQCLAKDIVNIVACEGEDRIERYEVAGKWRARLTMAGFTSSPMSTNVREAIRKLIKQYCDRFKMKEEMGGLHFGWDDKNLIVASAWK* 592
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g0741 591 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 10 590 IPR005202 -
Apr9g0741 591 MobiDBLite consensus disorder prediction 190 215 - -
Apr9g0741 591 Coils Coil 142 162 - -
Apr9g0741 591 Pfam GRAS domain family 223 591 IPR005202 -
Apr9g0741 591 ProSiteProfiles GRAS family profile. 212 591 IPR005202 -
Apr9g0741 591 MobiDBLite consensus disorder prediction 191 215 - -
Apr9g0741 591 PANTHER GRAS FAMILY TRANSCRIPTION FACTOR 10 590 IPR030011 GO:0003700|GO:0005634
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g0741 Apr-Chr9 13180312 13184250 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr9g0741 1 591 GRAS Transcription Factor Family AT1G21450 61.462 0.0 691
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Apr9g0741 GRAS 8.8e-134 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g0741 - - gmx:100807048 978.778
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr9g0741 9 13180312 13184250 Apr9g0741 9 13180312 13184250 ECH
Apr9g0741 9 13180312 13184250 Apr1g0737 1 8794065 8797861 PCT