Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g0740 ATGAATCCCGCGGAGGCCGCAAACGAAGCCCTCCACAGCGTCGAAGAGGGTTCTGCTGCTAAGACGAAATGCCCTGGCAAGTTCTACGATGTCTATGGACCCCAAGGCAAGGCAGATGTTGTTTTCAAGTCACAAGAAGATAATTCAACTTTGAACATAAGTGATGTTCAAGGACTTATAACATGGGTGCTCGGTGAAGGATTTATGCCATCATGGGTTTTTATCAAGAATAAACCTCTTATTCCCAAAGTGGTTATGCTCTACGTCCCTGGCCTGGATGCAGCTTTGTTCTTGTCGCAGTCTAAAATGCTTCCCAGTTTAAAAAATTTTTGTGGCAAACCAAGGCCAGTCTTGGCACTTAGGTCTGTTTGTGTATCAGATGGTATGCAGACTATAGATGCACTACTAACATGCAAGGTGAAAAGAAAGAGGGATCAGAATAGTTCAATAATGAGGAAATCTGCCTGGACATCTCGACAAGGTTGTGGTGGTACAGACAATCTATCGTTTATGGAGCTTACAAAAGACATACCTTTTCCTGTTACATACTATACACTAACAGAGAAAGAGCTGGAAGAGAATGGATATTTTGTTAATAAGCCAGATTTTCTTTGTACATTGCCTGCTCCTTCAAGATCTCCTTTTTATGAGATGTTAGCACTTGATTGTGAGATGTGCATAACAAGTGAAGGTTTTGAGCTGACAAGAATTACTCTAGTGGATGTCAAAGGACAGGTTTTGATAGATAAATTGGTTAAACCAACAAATGCTATCATTGATTACAACACAAGATATAGTGGAATAACATCAGAGATGCTAGACGGGGTGACAACAAATCTAAGAGACATTCAGGAAGAGTTTCTAAAATTGGTTTATAAAGAGACTATCCTTGTGGGGCATTCTTTGGAAAATGATTTATTAGCACTGAAAATATCGCATGACTTGGTCATTGACACAGCAGTATTATACAAACATCCCCGAGGATCATCTCATAAAACTGCTCTACGGTTTCTTGCTAAGAGATTTCTTTCAAGGGAGATACAACAATCAGGGAATGGACATGACAGCATTGAAGATGCTAGAGCTACCATGGAGTTGGCACTACTGAAGATCAGAAATGGGCCTGACTTTGGTTCCCCTCCATCCTTTATGCGGAAAAAGCTCCTTTCCGTTTTGAGTGAGTTTGGCAGAACTTCCTCCTTGATTGATGATATATCCATAGTAAAACGGTATGTCTCTGAGTCCTCTCATGCAATTCCTGTGACCTCTGATGATGAAGCACTTGCAAGGACCAACAAGGAGGTGAAGAATGAAAAGGTACATTTTATCTGGACTCAGTTTTCAGAGTTACATTCATACTTGAAGAAACAGGCTGAAGATTCAGAGAACTTGAATAGAAGACTTGCAGAGATGATGGCATTACATACATGTCAGAATAATTTTGCAAAAGGGAAAGGCTTCAAGGTCAAAGCATCTGCTGAATTGAAGGAAATTCTGGCTCGCATGGATGCTAGAATTCAAAATCTGTATTTGTCATTACCCACGAATTCTATGATGATAATTTGCACTGGTCATGGAGACACAGCAGTTGTCCGCAGGCTGAGAAGAATGCTTACGGAGCAGAATGATAGTACTTTATGTCGCGAGGAGATTGTGGAAATATTGGAAGAGGTTCAGGCTCGTGCTGAAGTAGCTTTGTGTTTTGTAGGCGTAAAGCATTGA 1722 0.4077 MNPAEAANEALHSVEEGSAAKTKCPGKFYDVYGPQGKADVVFKSQEDNSTLNISDVQGLITWVLGEGFMPSWVFIKNKPLIPKVVMLYVPGLDAALFLSQSKMLPSLKNFCGKPRPVLALRSVCVSDGMQTIDALLTCKVKRKRDQNSSIMRKSAWTSRQGCGGTDNLSFMELTKDIPFPVTYYTLTEKELEENGYFVNKPDFLCTLPAPSRSPFYEMLALDCEMCITSEGFELTRITLVDVKGQVLIDKLVKPTNAIIDYNTRYSGITSEMLDGVTTNLRDIQEEFLKLVYKETILVGHSLENDLLALKISHDLVIDTAVLYKHPRGSSHKTALRFLAKRFLSREIQQSGNGHDSIEDARATMELALLKIRNGPDFGSPPSFMRKKLLSVLSEFGRTSSLIDDISIVKRYVSESSHAIPVTSDDEALARTNKEVKNEKVHFIWTQFSELHSYLKKQAEDSENLNRRLAEMMALHTCQNNFAKGKGFKVKASAELKEILARMDARIQNLYLSLPTNSMMIICTGHGDTAVVRRLRRMLTEQNDSTLCREEIVEILEEVQARAEVALCFVGVKH* 574
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g0740 573 Gene3D - 216 376 IPR036397 GO:0003676
Apr9g0740 573 SMART exoiiiendus 217 376 IPR013520 -
Apr9g0740 573 CDD REX1_like 219 368 IPR034922 -
Apr9g0740 573 PANTHER LD29573P 14 558 - -
Apr9g0740 573 Coils Coil 454 474 - -
Apr9g0740 573 Pfam Exonuclease 220 366 IPR013520 -
Apr9g0740 573 PANTHER RNA EXONUCLEASE REXO1 / RECO3 FAMILY MEMBER-RELATED 14 558 - -
Apr9g0740 573 SUPERFAMILY Ribonuclease H-like 218 371 IPR012337 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g0740 Apr-Chr9 13153394 13172230 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr9g0740 211 366 C2H2 Transcription Factor Family AT3G27970 28.249 3.54e-07 50.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g0740 K14570 - gmx:100802793 973.385
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr9g0740 9 13153394 13172230 Apr9g0740 9 13153394 13172230 ECH