Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g0736 ATGGTGCCTCCGGGGCCACCCACTCCGATTGGTGGTGCCCAGTCTGTGTCGCCGTCTCTTTTGAGATCAAATTCGGGAATGTTGGGGGGCCAAGGGGGCCCTGTGCCTCCACAGACTTCGTTCCCTTCCCTGGTTTCGCCGCGGAATCAGTTTAACAACATGAACATCCTAGGTAATATGTCTAATGTAACTTCCTTGCTGAATCAGTCTTTCCCAAATGGGATTCCAAATTCTGGGATCTCTGGCCCTGGGAGTAGCCAGCGCAGTGGAGTTGTTGATGCTGTGGCGGAATCGGATCCACTATCTGGGGTTGGCAATGGAATGAGTTTTGGCAATTCTTTGCAATCGAATTTGGTGAACCATGGTTCATCTGGTCAAGGTCAGGGTCAACAATTTTCAAACGCTTCTGGTAACCAGTTGTTGCCAGATCAACAGCATTCCCAGCAACATGAGCCTCTGAATTTCCAACATAGTCAGCAGTCAATGCATCAGTTCTCTGCTCCTCTGAACACTCAGCAGCAGCAGCATTTTCAGTCGATTCGTGGAGGGATGGGTGGTGTTGGACAGGTGAAGTTGGAGCAGCAGGTAAACAATGATCAATTTGGGCAGCAGCAGCAGTTGAGGAGCCTTGCTCAGGTAAAATTGGAACCGCAACAACTACAAACAATGAGAAATATGGCAACGGTAAAAATGGAGCCCCAGCATACTGATCAGCAGTTTTTGCATCAGCAACAACAGCAGCAACAGCAACAGCAACAGCAGCAGCAGCAGCAACAACTCCTTCACATGTCCAGGCAATCCTCTCAGGCTGCTGCTGCACAGATGAATCATCTTTTGCAGCAGCAGAGGCTTGTGCAATTCCAACAACAACAGCAGCAACTCTTGAAGGCAATGCCTCAACAGCGTTCCCAGCTTCCACAGCAGTTTCAACAGCAGAATATGAATAAGAAACCAGCATATGAACCTGGCATGTGTGCTAGGCGGCTAATGCATTACATGTATCAGCAACAGCATAGACCTGAAGATAACAACATCGAATTCTGGAGGAAATTTGTTGCTGAGTATTTTGCCCCTAATGCCAAAAAAAAGTGGTGTGTTTCCATGTATGGAAGTGGTAGACAAACTACTGGAGTTTTCCCCCAGGATGTATGGCACTGTGAAATATGTAACCGCAAACCTGGCCGTGGGTTTGAAGCGACTGCTGAGGTCCTTCCTAGGCTATTCAAAATAAAGTATGAAAGCGGTACTTTGGAAGAGCTGCTTTATGTTGACATGCCTCGTGAATATCATAATTCCTCTGGCCAGATTGTTCTAGATTATGCAAAAGCTATACAAGAAAGCGTTTTTGAGCAACTTCGTGTTGTTCGTGATGGTCAACTTCGAATAGTTTTCTCTCCTGACCTGAAGATATGTTCTTGGGAATTTTGTGCTCGGCGCCATGAAGAGCTCATCCCCAGAAGATTGTTAATACCTCAGGTTGGTCAGCTTGGAGCAGTTGCTCAAAAATACCAGGCATTTACTCAAAATGCAACACCCAATTTATCCGTTCCAGAGTTACAAAACAATTGCAATATGTTTGTTGCATCAGCCCGTCAGTTGGCAAAGGCCTTAGAAGTTCCATTGGTCAATGATTTAGGATATACAAAGAGATATGTACGGTGCCTCCAGATATCAGAAGTAGTAAATAGCATGAAAGATTTGATAGATTATAGCAGAGAAACAGAGACTGGACCTATGGAAAGCTTAGCCAAATTCCCTCGGAGAACAAGTGGTTCATCTGGGCTTCATAGTCAGGCACAGTCTGAAGATCAATTACAGCAGCAGTCACAGCCACAGCAGCATATGGTGGCCCGCACTTCAAATGGTGATCAAAACTCTCTGCAAATTGCTTCAAGCAATGGTGTGGCTAGTGTAAATAACCCTGTCAATTCAGCATCTGCATCAACCACCACAAGTACCATTGTTGGACTTCTTCACCAGAATTCAATGAATTCTAGACAAAGTTCAATGAACAATGCAAGCAGTCCTTATGGAGGTAGTTCTGTTCAGATTCCATCCCCAGGTTCCTCCAGTAATGTGCCACCAGCTCAACCAAATGCATCTCCTTTTCAATCACCAACACTATCGTCATCTAACAACCCACAAACATCTCACCCTGCCTTAATTTCTGCAAATCACATGGGTAGAGCAAACTCACCAGCTAATATTTCCTTGCAACAACAGCAGACATCTCTTTCTGGTGAAGCTGACCCTAGCGATACTCATAGCTCAGTCCAGAAAATCATTCATGAGATGATGTCCTCACAGATGAATGGCACAGGTGGAATGGCAGGTGCTGGTTCTCTTGGAAATGAGATGAAAAATGTAAATGGGATTCTACCAGTGAGTACCAATACAGGGCTCAACAGTGGCAATGGCCTGGTGGGTAATGGGGCAGTGAACAGTAATTCGGGTGTTGGGGTTGGTGGTTATGGCACAATGGGTCTTGGTCCATCTGGTATGACCAATGGAATGAGACCTGTAATAGGACATAGTTCAATCATGCATGGAAGGGGAGGAGGAATGGCATCTATTGCTCGGGATCAAGTTATGAATCATCAACAGGATTTGTCAAGCCAAATACTTAGTGGGCTAGGAGCAGGAAATGGTTTTAATAATCTTCAATTTGATTGGAAACCATCTCCATGA 2688 0.4535 MVPPGPPTPIGGAQSVSPSLLRSNSGMLGGQGGPVPPQTSFPSLVSPRNQFNNMNILGNMSNVTSLLNQSFPNGIPNSGISGPGSSQRSGVVDAVAESDPLSGVGNGMSFGNSLQSNLVNHGSSGQGQGQQFSNASGNQLLPDQQHSQQHEPLNFQHSQQSMHQFSAPLNTQQQQHFQSIRGGMGGVGQVKLEQQVNNDQFGQQQQLRSLAQVKLEPQQLQTMRNMATVKMEPQHTDQQFLHQQQQQQQQQQQQQQQQQLLHMSRQSSQAAAAQMNHLLQQQRLVQFQQQQQQLLKAMPQQRSQLPQQFQQQNMNKKPAYEPGMCARRLMHYMYQQQHRPEDNNIEFWRKFVAEYFAPNAKKKWCVSMYGSGRQTTGVFPQDVWHCEICNRKPGRGFEATAEVLPRLFKIKYESGTLEELLYVDMPREYHNSSGQIVLDYAKAIQESVFEQLRVVRDGQLRIVFSPDLKICSWEFCARRHEELIPRRLLIPQVGQLGAVAQKYQAFTQNATPNLSVPELQNNCNMFVASARQLAKALEVPLVNDLGYTKRYVRCLQISEVVNSMKDLIDYSRETETGPMESLAKFPRRTSGSSGLHSQAQSEDQLQQQSQPQQHMVARTSNGDQNSLQIASSNGVASVNNPVNSASASTTTSTIVGLLHQNSMNSRQSSMNNASSPYGGSSVQIPSPGSSSNVPPAQPNASPFQSPTLSSSNNPQTSHPALISANHMGRANSPANISLQQQQTSLSGEADPSDTHSSVQKIIHEMMSSQMNGTGGMAGAGSLGNEMKNVNGILPVSTNTGLNSGNGLVGNGAVNSNSGVGVGGYGTMGLGPSGMTNGMRPVIGHSSIMHGRGGGMASIARDQVMNHQQDLSSQILSGLGAGNGFNNLQFDWKPSP* 896
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g0736 895 Pfam LIM-domain binding protein 328 582 IPR029005 -
Apr9g0736 895 MobiDBLite consensus disorder prediction 231 273 - -
Apr9g0736 895 MobiDBLite consensus disorder prediction 1 47 - -
Apr9g0736 895 MobiDBLite consensus disorder prediction 586 627 - -
Apr9g0736 895 MobiDBLite consensus disorder prediction 665 720 - -
Apr9g0736 895 MobiDBLite consensus disorder prediction 12 26 - -
Apr9g0736 895 PANTHER LIM-DOMAIN BINDING PROTEIN/SEUSS-RELATED 1 894 - -
Apr9g0736 895 MobiDBLite consensus disorder prediction 575 627 - -
Apr9g0736 895 MobiDBLite consensus disorder prediction 115 163 - -
Apr9g0736 895 PANTHER LIM DOMAIN-BINDING PROTEIN 1 894 IPR029005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g0736 Apr-Chr9 13117207 13130278 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr9g0736 1 793 C2H2 Transcription Factor Family AT1G43850 59.264 0.0 733
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g0736 - - gmx:100798031 1321.99
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr9g0736 9 13117207 13130278 Apr9g0736 9 13117207 13130278 ECH