Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g0724 ATGGACAAAGGGTGGGTTTCAAGTGAGGGTATTGGAGCTTTTTGGGTGATGGGTAGGTGTTGGTTGGTAATGGTCTTAATTGGGGTGGGGTGTGGCAGCTTGTTGGGTACAATAGGAGTAGAAGGGTATCCAAGTGAGGATCTGGTTGTGAGATTGCCTGGCCAACCTAAGGTTGGGTTTAAGCAATATGCTGGGTATGTTGATGTAGATGTCAAGCATGGAAGGAGCCTTTTCTATTATTTTGTGGAGTCTGAGCAAGACCCTGATAAGAAGCCCCTCACACTTTGGCTAAATGGAGGTCCTGGATGTTCCTCCATGGGAGGAGGTGCTTTCACTGAATTGGGTCCATTTTATCCTAAAGGTGATGGACGTGGACTAAGAAGAAATTCCAAGTCTTGGAATAAAGCTTCCAACCTCCTCTTTGTGGAGTCTCCTGCTGGAGTTGGTTGGTCATACTCAAATACAACTTCAGATTATAACACTGGAGACGCCTCCACTGCCAATGATATGTACGTGTTCATGCTGAAATGGTACGAGAAGTTTCCATCATACAGAACAAGAGAGCTGTTCCTTACTGGAGAAAGTTATGCAGGGCATTATATACCACAATTAACTAATGCTTTACTGGACCATAATGCTCGTTCAACTGGTTTCAAATTCAATATTAAAGGAGTTGCTATTGGAAACCCGCTTTTGAGACTTGATCGGGATGCACCTGCTACATACGAATACTTCTGGTCTCATGGAATGATTTCTGATGAAGTTGGCCTTGCCATTATGAATGATTGTGATTTTGATGATTACGACCATGCAAGTCCTCACAACCTTTCTCATTCGTGCAACAAAGCCATATATGAAGCAAATATAATAGTTGGGGATTATATAAATAACTACGATGTAATTTTAGATGTTTGTTATCCATCCATAGTGGAACAAGAACTGAGACTGAAAAAGATGGCAACTAAAGTAAGTGTGGGTGTAGATGTCTGTATGACTTTAGAAAGAAGTTTCTACTTCAACCTCCTTGAGGTTCAAAAGGCTCTGCATGCAAACCGTACTAATCTTCCTTATAGTTGGTCCATGTGTAGTCGTGTTCTAAACTATAGTGACACTGATGGTAACATCAACATCCTTCCAATTCTCAAAAGGATAGTCCAAAAGCATATCCCAGTATGGATTTTCAGCGGAGACCAAGATTCTGTTGTGCCATTATTGGGATCTCGAACACTCATTCGTGAACTAGCTCACGAATTGAAGTTCAAGATTTCAGTCCCATATGGAGCTTGGTTCCACAAAGGCCAGGTTGGTGGTTGGGTGACAGAGTATGGAAATTTGTTGACTTTTGCCACTGTAAGGGGTGCTGCACACATGGTACCTTACGCACAACCTGCAAGAGCACTGCATCTATTCAGTTCATTTGTGCGTGGCAGGAGATTACCAAACACAACACATCCTTCAATTGATGAATAA 1470 0.4218 MDKGWVSSEGIGAFWVMGRCWLVMVLIGVGCGSLLGTIGVEGYPSEDLVVRLPGQPKVGFKQYAGYVDVDVKHGRSLFYYFVESEQDPDKKPLTLWLNGGPGCSSMGGGAFTELGPFYPKGDGRGLRRNSKSWNKASNLLFVESPAGVGWSYSNTTSDYNTGDASTANDMYVFMLKWYEKFPSYRTRELFLTGESYAGHYIPQLTNALLDHNARSTGFKFNIKGVAIGNPLLRLDRDAPATYEYFWSHGMISDEVGLAIMNDCDFDDYDHASPHNLSHSCNKAIYEANIIVGDYINNYDVILDVCYPSIVEQELRLKKMATKVSVGVDVCMTLERSFYFNLLEVQKALHANRTNLPYSWSMCSRVLNYSDTDGNINILPILKRIVQKHIPVWIFSGDQDSVVPLLGSRTLIRELAHELKFKISVPYGAWFHKGQVGGWVTEYGNLLTFATVRGAAHMVPYAQPARALHLFSSFVRGRRLPNTTHPSIDE* 490
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g0724 489 Gene3D - 377 476 - -
Apr9g0724 489 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 31 - -
Apr9g0724 489 ProSitePatterns Serine carboxypeptidases, serine active site. 191 198 IPR018202 GO:0004185
Apr9g0724 489 PRINTS Carboxypeptidase C serine protease (S10) family signature 129 141 IPR001563 GO:0004185|GO:0006508
Apr9g0724 489 PRINTS Carboxypeptidase C serine protease (S10) family signature 142 152 IPR001563 GO:0004185|GO:0006508
Apr9g0724 489 PRINTS Carboxypeptidase C serine protease (S10) family signature 177 202 IPR001563 GO:0004185|GO:0006508
Apr9g0724 489 PRINTS Carboxypeptidase C serine protease (S10) family signature 446 459 IPR001563 GO:0004185|GO:0006508
Apr9g0724 489 SUPERFAMILY alpha/beta-Hydrolases 45 479 IPR029058 -
Apr9g0724 489 PANTHER CARBOXYPEPTIDASE 23 483 - -
Apr9g0724 489 Gene3D alpha/beta hydrolase 44 306 IPR029058 -
Apr9g0724 489 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 23 483 IPR001563 GO:0004185|GO:0006508
Apr9g0724 489 Pfam Serine carboxypeptidase 54 476 IPR001563 GO:0004185|GO:0006508
Apr9g0724 489 Gene3D - 330 366 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g0724 Apr-Chr9 12598409 12604382 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr9g0724 337 479 Calmodulin-binding Proteins AT2G22960 26.573 6.92e-10 56.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g0724 K16297 - gmx:100801752 914.064
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr9g0724 9 12598409 12604382 Apr9g0724 9 12598409 12604382 ECH