Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g0695 ATGAGCTGCTTTTGTTCTCGTGGAAAGGATGTGAGCGTCAATAATTTAGGGTCAAAGTCCAACTCCAAGAGAGCTACGGCCACGAGTTTCAGTTTTCGCCAGCTTGCATCGGCAACAGCAAGTTTCAAGGAAGTGAATTTGATTGGGGAAGGAGGTTTTGGAAAAGTTTACAAGGGTCGTCTCCCAACAGGCCAGGTCGTTGCTATCAAACAATTACGTCTAGATGGAGATGGTCATCAAGGTCATCGGGAATTTGTCACCGAGGTCCTTCTGTTAAGCCTTCTCCATCATTCTAATCTTGTTAAATTAATTGGTTACTGCACCCATGGAGTTCAAAGGCTTTTGGTTTATGAATACATGCCTATGGGAAGCCTCGAACATCATCTTTTCGATCCTAACTCTCAGAAAAAACCACTAAGTTGGACTACTCGAATGAAGATTGCTGTTGGAGCTGCCAGGGGCCTCCAATATCTCCATTGTGAAGCAGCTCCACCTGTTATCTATCGTGACTTGAAATCTGCCAACATTTTGTTAGACAAGGATTTTAACCCAAAACTCTCAGATTTTGGGCTCGCTAAACTGGGACCTATTGGAGATAACACCCATGTTTCCACCAGAGTCATGGGAACATACGGCTACTGTGCCCCCGAATACGCCATGACTGGCAAATTAACTCTTAAATCTGATATCTATAGCTTTGGTGTCGTCTTGCTAGAGTTGATCACTGGACGTAAAGCGATAGATGTCAGTAGAAAACCACGGGAGCAAACCTTAGTTTCATGGTCTCGTCCATTTTTGAGTGACCGCAGAAAGTTTTCGCAAATGGTTGACCCTCTTTTGGAAGGAAAATACCCCGTACGTTGTTTGCATTGTGCAATTGCTGTGACTGCGATGTGCCTCCAGGAGCAGCCCAATCTTCGTCCACCCGTTGGTGATATTGTTGCTGCATTGGAGTACTTGGCCTCCGAGAGTAATTAG 978 0.4499 MSCFCSRGKDVSVNNLGSKSNSKRATATSFSFRQLASATASFKEVNLIGEGGFGKVYKGRLPTGQVVAIKQLRLDGDGHQGHREFVTEVLLLSLLHHSNLVKLIGYCTHGVQRLLVYEYMPMGSLEHHLFDPNSQKKPLSWTTRMKIAVGAARGLQYLHCEAAPPVIYRDLKSANILLDKDFNPKLSDFGLAKLGPIGDNTHVSTRVMGTYGYCAPEYAMTGKLTLKSDIYSFGVVLLELITGRKAIDVSRKPREQTLVSWSRPFLSDRRKFSQMVDPLLEGKYPVRCLHCAIAVTAMCLQEQPNLRPPVGDIVAALEYLASESN* 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g0695 325 Pfam Protein kinase domain 42 253 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr9g0695 325 ProSitePatterns Serine/Threonine protein kinases active-site signature. 166 178 IPR008271 GO:0004672|GO:0006468
Apr9g0695 325 Gene3D Phosphorylase Kinase; domain 1 6 119 - -
Apr9g0695 325 Gene3D Transferase(Phosphotransferase) domain 1 120 325 - -
Apr9g0695 325 PANTHER OS07G0668900 PROTEIN 19 323 - -
Apr9g0695 325 SUPERFAMILY Protein kinase-like (PK-like) 25 318 IPR011009 -
Apr9g0695 325 SMART serkin_6 42 320 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr9g0695 325 PIRSF ILK 8 325 - -
Apr9g0695 325 CDD STKc_IRAK 48 318 - -
Apr9g0695 325 PANTHER OS07G0668900 PROTEIN 19 323 - -
Apr9g0695 325 ProSitePatterns Protein kinases ATP-binding region signature. 48 70 IPR017441 GO:0005524
Apr9g0695 325 ProSiteProfiles Protein kinase domain profile. 42 320 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g0695 Apr-Chr9 11551172 11553144 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr9g0695 14 322 Glycoside Hydrolase AT3G07070 60.968 1.67e-137 394
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-1 Apr9g0695 Pkinase 9.1e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g0695 - - gmx:100794722 531.946
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr9g0695 9 11551172 11553144 Apr9g0695 9 11551172 11553144 ECH